DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and abcg1

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001103924.1 Gene:abcg1 / 556979 ZFINID:ZDB-GENE-070424-84 Length:673 Species:Danio rerio


Alignment Length:625 Identity:250/625 - (40%)
Similarity:370/625 - (59%) Gaps:49/625 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YLPSWPAVNLQFSELCYVVPDQTNASKT--KTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLA 107
            |||..||||::|.:|.|.||:.....|.  ||:|:.::|.|....|.||:|||||||:||:|:||
Zfish    75 YLPRRPAVNIEFKDLSYSVPEGPWWRKKGYKTLLKGISGNFTGGALVAIMGPSGAGKSTLMNILA 139

  Fly   108 GFGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLE 172
            |:......||||:|..|||:|.|||:|.||||.|:|....||.|.|:::|||||.::  .:.:.|
Zfish   140 GYRETGMKGEILINGHPRDLRSFRKVSCYIMQDDMLLPHLTVQEAMMVSANLKLQEK--DEGRRE 202

  Fly   173 VIDEILGMLRLKDTLNTMAQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLK 237
            ::.|||..|.|.:...|....||||:||||.|||||||||||:|.||||:|||..|..|.::|:|
Zfish   203 MVREILTALGLLECAKTRTSHLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSSSCFQVVSLMK 267

  Fly   238 VLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFI 302
            .||.|||||||:||.||||:||:.|.:|||::|||:|:||.|:::|:|::.||.||..:||||||
Zfish   268 ALAQGGRTVICTIHQPSAKVFELFDKLYVLSQGQCIYRGKVSSLIPYLRDLGLSCPTYHNPADFI 332

  Fly   303 IEVACLEYGGSYHEPMVEAV--------------GNG--KVARWSPPAVEGETTTTKTDTTSGAS 351
            :|||..|||..... :|:||              |||  ....|..|:.|      ::.::.|..
Zfish   333 MEVASGEYGDQTAR-LVKAVQEHKCEKDYKTEMNGNGVHNPFLWHRPSDE------ESSSSEGCH 390

  Fly   352 SFYERDQFDEEISPKLLEAKCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFG 416
            ||               .|.|  ..|:.:|..|..:.:.||.....|:...::.:.:|:|.||.|
Zfish   391 SF---------------SASC--LTQFCILFKRTFLSIMRDSVLTHLRIMSHLGIGILIGLLYLG 438

  Fly   417 MGTSASKALFNFGFMFTIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLP 481
            :|..|.|.|.|.||:|..::..::..:||.:|.||.|:.:..||:.|.||.|.:||.|...:.:|
Zfish   439 IGNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMGVFLREHLNYWYSLKAYYLAKTMADVP 503

  Fly   482 SMFILAVIYLSIVYLMSSQPLEWFRFAMLFTIAFVTALTSDSFGLLI-SSRLSLVNAMFMGPVLA 545
            ...:..|.|.||||.|:|||.:..||.:...:..:|:|.:.|.|||| ::..||..|.|:|||.|
Zfish   504 FQIVFPVAYCSIVYWMTSQPSDAVRFILFLALGTLTSLVAQSLGLLIGAASTSLQVATFVGPVTA 568

  Fly   546 VPLILLSIYGIGYGGGTYISPLMRFLMHLSYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKS 610
            :|::|.|.:.:.:   ..|...::::.::||:|:..||::.|:|...|.|..|:..|. |.|:||
Zfish   569 IPVLLFSGFFVSF---DTIPKYLQWISYISYVRYGFEGVILSIYGLDREDLHCDKDET-CHFQKS 629

  Fly   611 KVLLAFLGFENMHYLWSLSCLMSFYLLFTVAAYFMIRLRL 650
            :.:|..|..|:.........|..|::...:.|||::|.::
Zfish   630 EAILKELDVEDAKLYMDFIVLGIFFISLRLIAYFVLRYKI 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 121/226 (54%)
3a01204 67..654 CDD:273361 238/603 (39%)
ABC2_membrane 381..587 CDD:279410 70/206 (34%)
abcg1NP_001103924.1 3a01204 67..673 CDD:273361 250/625 (40%)
ABCG_EPDR 81..306 CDD:213180 121/226 (54%)
ABC2_membrane 403..605 CDD:279410 70/204 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574354
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.810

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