DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and Abca14

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_038957098.1 Gene:Abca14 / 365362 RGDID:1561491 Length:1691 Species:Rattus norvegicus


Alignment Length:801 Identity:148/801 - (18%)
Similarity:279/801 - (34%) Gaps:279/801 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SQISSLQYSSDINADSLEPDQSEDFQTVLGLKYLPSWPAVNLQFSELCYVVPDQTNASKTKTILR 77
            ||:|.|..|     |.:|| :..|.:..:.:::|         :.|.       |..:.|...::
  Rat   509 SQVSDLPPS-----DFMEP-EPVDLEAGIQIQHL---------YKEF-------TLKNSTLMAVK 551

  Fly    78 RVNGMFHSHELTAIIGPSGAGKTTLLNLLAGF-----GAVCESGEILVNNSPRDMRVFRKMSRYI 137
            .::...:..::|.::|.:||||||.|::|.|.     |.|..||..:.:    ||...||.....
  Rat   552 DLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPTKGKVYISGYDISS----DMVQVRKSLGLC 612

  Fly   138 MQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLEVIDEILGMLRLKDTLNTMAQKLSGGERKRL 202
            .|.|:|....||.|.:.....:|.....|..:::..:....|:|:..   |||::.||||.:::|
  Rat   613 PQDDLLFPLLTVSEHLYFYCVIKGISSTNRPREIHRMLTSFGLLQKS---NTMSKDLSGGMKRKL 674

  Fly   203 CIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYVL 267
            .|.:.|:.:..|:.|||||:|:|.:|......||:........::.:.|...|.:.....|:.|:
  Rat   675 SIIIALIGDTKVVILDEPTSGMDPVSRRAIWDLLQHYKKDRTILLTTHHMDEADVLGDRIAILVM 739

  Fly   268 AEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFIIEVACLEYGGSYHEPMVEA--VGNGKVARW 330
            ...:|.    ||::  |||..                     ||..||..:|:.  ..:||:::.
  Rat   740 GVLKCC----GSSL--FLKKL---------------------YGVGYHLVIVKTPDSDDGKISQL 777

  Fly   331 SP---PAVEGETTTT--------KTDTTSGASSFYERDQFDEEIS-------------------- 364
            ..   |..|.||...        |..|...|..|.:.::..||:.                    
  Rat   778 IKNYIPTAEMETNVAAELSFILPKEHTHRFAELFTDLEERQEELGISGFGVSMTTMDEVFFKVSN 842

  Fly   365 ------------------------------PKLLEA------------KCSWWL---QYKLLLVR 384
                                          |:..|.            ...|.|   |::.:.::
  Rat   843 LADLKLNTEIAQSASTVNPSTSENNENMNVPRNFERSGYSGRYSDSSFNAGWPLYMQQFRAMFIK 907

  Fly   385 MLIQMWRDKSYIKLKFYMNIVLAL--LVGSLYFGMGTSASK------------------------ 423
            .::..||:...:.|:     :|||  |...|..|:|.|..|                        
  Rat   908 RVMFSWRNWKLLLLQ-----LLALQGLTYVLIKGIGFSVPKEPARVMDLEQYGETTVPFSVSGDP 967

  Fly   424 -------------------------------ALFNFGFMFTIVIAYLYLPMMPVLLYFPTEINLL 457
                                           .|.|...:::.::|:              .:::.
  Rat   968 PLTQKLTKNLEIMLKDKKQKVHEVQGGVQDYLLTNKDCIYSCIVAF--------------SLDVT 1018

  Fly   458 KREYN-NQWYRLSSYYAAMVTSKLPSMFILAVIYLS-----IVYLMSSQPLEWFR---------- 506
            ::|.. ..|:...:|:|:.::..:....|..  |||     |......||..:.:          
  Rat  1019 RKEKTFTFWFNNEAYHASPLSLSILDNIIFK--YLSGPDATITVSNKPQPQPFTKGRSEERSASG 1081

  Fly   507 FAMLFTIAFVTALTSDSFGLL-ISSRLSLV-NAMFMGPVLAVPLILLSIYGIGYGGGTYISPLM- 568
            ..::|.:.|..::.:..|.|: ::.|:|.. :..|:.          .:|.:.:    ::|.|: 
  Rat  1082 IQIVFNLLFGMSIFTSGFCLMTVTERVSKAKHIQFVS----------GVYTLNF----WLSALLW 1132

  Fly   569 ----RF----LMHLSYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKSKVLLAFLGFENMHYL 625
                .|    |:.|.:|...:..|   |.:|...||:              ::|...|:..:.::
  Rat  1133 DLIIHFVACVLLLLVFLYTDVHIL---LENYNFLDTM--------------LILMLFGWSIIPFI 1180

  Fly   626 WSLSCLMSFYLLFTVAAYFMI 646
            :    |:||:...:..||..|
  Rat  1181 Y----LLSFWYNNSTNAYIKI 1197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 58/229 (25%)
3a01204 67..654 CDD:273361 137/747 (18%)
ABC2_membrane 381..587 CDD:279410 41/289 (14%)
Abca14XP_038957098.1 rim_protein <100..1681 CDD:130324 148/801 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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