DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and Abca15

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_796187.2 Gene:Abca15 / 320631 MGIID:2388709 Length:1668 Species:Mus musculus


Alignment Length:803 Identity:160/803 - (19%)
Similarity:286/803 - (35%) Gaps:223/803 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EPDQSE----DFQTVLGLKYLPSWP---AVNLQFSELCYVVPDQTNASKTKTILRRVNGMFHSHE 87
            ||.|.:    .|...:..||..:.|   ...:|...|..|.  |.| :.||..::.::...:..:
Mouse   491 EPPQQKLEITQFYERVESKYFEAEPTDLTAGIQIKHLHKVF--QKN-NTTKVAIKDLSLNLYEGQ 552

  Fly    88 LTAIIGPSGAGKTTLLNLLAGFGAVCESGEILVNNS--PRDMRVFRKMSRYIMQTDVLDSQFTVL 150
            :|.::|.:||||:|.|::|:|.... .|||..|:..  .:.|...|.......|.::|....||.
Mouse   553 VTVLLGHNGAGKSTTLSILSGLYPP-TSGEAYVHGEDISQHMDQVRNSLGLCPQQNLLFDHLTVS 616

  Fly   151 EMMILAANLKLGKELNLKQK--LEVIDEILGMLRLKDTLNTMAQKLSGGERKRLCIALELVNNPP 213
            |.:.....:|     .:.||  ||..:.:|....|.:..:..::.||||.:::|.|.:.|:....
Mouse   617 EHLYFYCRIK-----GVPQKMYLEETNNMLSAFNLMEKCDAFSKSLSGGMKRKLAIIIALIGGSK 676

  Fly   214 VIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYVLAE--------- 269
            |..|||||:|:|..|......:|:.... .||::.:.|        .:|...||.:         
Mouse   677 VAILDEPTSGMDPASRRSTWDILQTYKQ-NRTILLTTH--------YMDEADVLGDRIAIMVRGT 732

  Fly   270 ----GQCVY----QGKGSNIVPFLKNFGLCCPI--------TY-----------NPADFII---- 303
                |..|:    .|.||::|...:.:   |.|        :|           |...||:    
Mouse   733 LRCCGSSVFLKRLYGVGSHLVMVKEPY---CDIAEISKLIHSYVPTATLETNVGNELSFILPKEY 794

  Fly   304 ----------------EVACLEYGGSY--HEPMVEAVGNGKVARWSPPAVEGETTTTKTD----- 345
                            .:....:|.|.  .|.:...|.|.:.::....|.:..:..:|.:     
Mouse   795 THRFEALFTALEENQENLGISSFGVSITTMEEVFLKVSNLEDSKTDIEATQSPSVGSKGNKNGDV 859

  Fly   346 TTSGASSFYERDQFDEEISPKLLEAKCSWWL-QYKLLLVRMLIQMWRDKSYIKLKFYMNIVLA-- 407
            .:||...|..:.: |:.|   :....||.:| |::.:.::.|:..||:...|.::. :.::::  
Mouse   860 ESSGRVGFPTQSE-DQNI---VFNTGCSLYLQQFRAMFMKRLMYNWRNWRGILVQI-LGLIISTF 919

  Fly   408 LLVGSLYFGMGTSASKALFNFGFMFTIVIAYLYLPMMPVLLYFPTEI---------NLLK----- 458
            ||:.|..|.........|..:|  .|||         |..::..:.:         |:||     
Mouse   920 LLLKSHEFRYKKIRQMNLDEYG--QTIV---------PFSIWGKSNLTSSLLTHLENMLKPGNHQ 973

  Fly   459 -----------REYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLSIVYLMSSQPLEWFRFAMLFT 512
                       .|.|::...|.  ..|:....:.:...|.|::.:..|...|..|     .:|..
Mouse   974 LKEVQGDLLKYLEGNDECVHLC--VIALSIKVVANRVNLTVLFNNEAYHSPSLSL-----TVLDN 1031

  Fly   513 IAFVTALTSDSF---------------------GLLISSRLSLVNAMFMGPVLAVPLILLSIYGI 556
            |.|::...||:.                     |.:::.::.|..|:.:                
Mouse  1032 ILFMSLSGSDASITVFNKPQPSPQRKEWPGSTDGKIVAFKIQLGMALLV---------------- 1080

  Fly   557 GYGGGTYISPL---------MRFLMHLSYLRHSMEGLVASL-------------YDYGRADTICE 599
               .|..|..:         |:||..:|.|.:.:..||..|             :.|.:.|....
Mouse  1081 ---SGFCILTVTERHNKTKHMQFLSGVSILVYWLSALVFDLIIFFISCCFLLVMFKYCKFDIYVT 1142

  Fly   600 DTEIFCSFKKSKVLLAFLGFENMHYLWSLSCLM----SFYLLFTVAAYFMIRLRLK-----HSEV 655
            |..|.    .:.::|...|:..:...:.||.|.    |.|:...|..|....|.|.     .:.:
Mouse  1143 DYHIL----DTMLILTLFGWSAIPLTYLLSFLFSKSNSAYINLLVFCYLSGTLSLLMDTIIEARI 1203

  Fly   656 SPIFAYVIQ--LLTKYFNFTSYN 676
            |.|.:...|  ||.....|..||
Mouse  1204 STIMSNSTQTFLLNALLLFPMYN 1226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 60/245 (24%)
3a01204 67..654 CDD:273361 141/733 (19%)
ABC2_membrane 381..587 CDD:279410 43/262 (16%)
Abca15NP_796187.2 ABC2_membrane_3 144..464 CDD:289468
ABC2_membrane <267..383 CDD:304374
CcmA 522..831 CDD:224054 73/329 (22%)
ABC_subfamily_A 522..743 CDD:213230 60/238 (25%)
ABC2_membrane_3 <1009..1231 CDD:289468 46/246 (19%)
CcmA 1354..1648 CDD:224054
ABC_subfamily_A 1354..1575 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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