DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and Abcg3l3

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001100675.1 Gene:Abcg3l3 / 305142 RGDID:1564709 Length:647 Species:Rattus norvegicus


Alignment Length:699 Identity:170/699 - (24%)
Similarity:288/699 - (41%) Gaps:164/699 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PAVNLQFSELCYVVPDQTNASKTKTILRRVNGMFHSHE--------------------------- 87
            |....::.:|     .:||.|..:|:.......||:..                           
  Rat    11 PMAERRYGDL-----PETNTSDPETLTEEAVLSFHNISYRETVQSGFPLRQQTHVMERLSSISGI 70

  Fly    88 ----LTAIIGPSGAGKTTLLNLLAGFGAVCE-SGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQF 147
                |.||:||....::.||::||.....|. ||:||||..|:... |:..|.|:.|.||:....
  Rat    71 MGPGLNAIMGPQDGSRSLLLDVLAARRDPCGLSGDILVNGKPQPAN-FKCTSGYVPQNDVIMHTV 134

  Fly   148 TVLEMMILAANLKLGKELNLKQKLEVIDEILGMLRLKDTLNTMAQKLSGGERKRLCIALELVNNP 212
            ||.:.:..:|.|:|...:...:|...|:|:|.:|.|:...||..:  |...|||..||:|||...
  Rat   135 TVRDNLEFSAALRLPMTITRNEKRRRINEVLELLHLEKEQNTKPR--SKELRKRTSIAVELVTEH 197

  Fly   213 PVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGK 277
            |::|||:||||||..:::..||:|:.::..|||||.||:.|...||...|::.::|.|:.::.|.
  Rat   198 PILFLDDPTTGLDLRTTTDIIAVLRRMSKKGRTVIFSINQPQYSIFRFFDSLTLVASGKLMFHGP 262

  Fly   278 GSNIVPFLKNFGLCCPITYNPADFIIEVACLEYGG-----------SYHEPMVEAVG--NGKVAR 329
            ..:.:.:..:.|.......|||||.::|.   .||           ..||.:.|.:.  ..|:|.
  Rat   263 AQDALEYFTSAGYQYESHNNPADFFLDVI---NGGLCDTEEDGHEADEHEDLYERLHQVTEKLAN 324

  Fly   330 WSPPAVEGETTTTKTDTTSGASSFYERDQFDEE-ISPKLLEAKCSWWLQYKLLLVRMLIQMWRDK 393
            ....:.....|..|.|...|......|...:.. ::|                       .|...
  Rat   325 MYAQSPLHSDTRAKLDQLLGEQKQDRRSAMETTFVTP-----------------------FWHQF 366

  Fly   394 SYIKLKFYMN---------------IVLALLVGSLYFGMGTSASKALFNFGFMFTIVIAYLYLPM 443
            .:|.|:.:.|               ::||:.||:::..:....::.....|.:|       :|..
  Rat   367 GWITLRSFKNFKGFPWVTVIQAIIAVILAVFVGTIFRLLQNVCTEVKARAGLLF-------FLTG 424

  Fly   444 MPVLLYFPT-EINLLKR-----EYNNQWYRLSSYYAAMVTSKL-PSMFILAVIYLSIVYLMSSQP 501
            ...:|.... |:.||.|     |:.:.:||:|||:...:.::| |...:.::|:..|.|.::...
  Rat   425 FECILSVSAGELFLLDRNHFLHEHTSGYYRVSSYFFGKLLAELIPRRLLPSMIFTLITYFIAGMK 489

  Fly   502 --LEWFRFAMLFTIAFVTALTSDSFGLLISSRLSLVNAMFMGP-VLAVPLILLSIY---GIGYGG 560
              ::.| |..:||:.           :|.||..||..::..|. ..|:|..|::||   .:.:.|
  Rat   490 TGVKGF-FVTIFTVM-----------MLASSASSLSLSLGAGENTAALPTTLITIYFMFMLFFSG 542

  Fly   561 GTYISPLMRFLMHLS---YLRHSMEGLVASLYDYGRADTIC--EDTE--------IFCSFKKSKV 612
            .:..|  :.||..||   ||.....|..|.|::.......|  .:||        :.|:.::   
  Rat   543 LSLFS--INFLPQLSWIQYLSIPHYGFRALLHNEFLGQNFCPEHNTEEVSRCQNYVICTGEE--- 602

  Fly   613 LLAFL----------GFENMHYLWSLSCLMSFYLLFTVAAYFMIRLRLK 651
               ||          ||...|.  :|:|:|...|:.:    ::..||||
  Rat   603 ---FLQNLDIDSSSWGFWENHL--ALTCIMIILLMIS----YVRLLRLK 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 78/256 (30%)
3a01204 67..654 CDD:273361 168/682 (25%)
ABC2_membrane 381..587 CDD:279410 51/236 (22%)
Abcg3l3NP_001100675.1 3a01204 64..644 CDD:273361 162/641 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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