DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and Abcg2

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001342406.1 Gene:Abcg2 / 26357 MGIID:1347061 Length:657 Species:Mus musculus


Alignment Length:665 Identity:187/665 - (28%)
Similarity:313/665 - (47%) Gaps:109/665 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LQFSELCYVVPDQTN--ASKT--KTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLA------G 108
            |.|..:.|.|..::.  ..||  |.||..:||:. ...|.||:||:|.||::||::||      |
Mouse    37 LSFHHITYRVKVKSGFLVRKTVEKEILSDINGIM-KPGLNAILGPTGGGKSSLLDVLAARKDPKG 100

  Fly   109 FGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLEV 173
            .     ||::|:|.:|:... |:..|.|::|.||:....||.|.:..:|.|:|...:...:|.|.
Mouse   101 L-----SGDVLINGAPQPAH-FKCCSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNER 159

  Fly   174 IDEI---LGMLRLKDTL--NTMAQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCI 233
            |:.|   ||:.::.|:.  ....:.:|||||||..|.:||:.:|.::||||||||||..:::..:
Mouse   160 INTIIKELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVL 224

  Fly   234 ALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNP 298
            .|||.::..|||:|.|||.|...||::.|::.:||.|:.|:.|.....:.:..:.|..|....||
Mouse   225 LLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGKLVFHGPAQKALEYFASAGYHCEPYNNP 289

  Fly   299 ADFIIEVACLEYGGSYHEPMV-------EAVGNGKVARWSPPAVE------------GETTTTKT 344
            |||.::|    ..|.....|:       ||....:.::...|.:|            || |..:.
Mouse   290 ADFFLDV----INGDSSAVMLNREEQDNEANKTEEPSKGEKPVIENLSEFYINSAIYGE-TKAEL 349

  Fly   345 DTTSGASSFYERDQFDEEISPKLLEAKCSW--WL---QYKLLL------VRMLIQMWRDKSYIKL 398
            |...||........|.|   |..:.:.|..  |:   .:|.||      |..||           
Mouse   350 DQLPGAQEKKGTSAFKE---PVYVTSFCHQLRWIARRSFKNLLGNPQASVAQLI----------- 400

  Fly   399 KFYMNIVLALLVGSLYFGMGTSASKALFNFGFMFTIVIAYLYLPMMPVLLYFPTEINLLKREYNN 463
               :.::|.|::|::||.:...|:......|.:|.:.....:..:..|.| |..|..|...||.:
Mouse   401 ---VTVILGLIIGAIYFDLKYDAAGMQNRAGVLFFLTTNQCFSSVSAVEL-FVVEKKLFIHEYIS 461

  Fly   464 QWYRLSSYYAAMVTSK-LPSMFILAVIYLSIVYLM--SSQPLEWFRFAMLFTIAFVTALTSDSFG 525
            .:||:|||:...|.|. ||..|:.:||:..|:|.|  ..:.::.| |.|:||:..| |.|:.|..
Mouse   462 GYYRVSSYFFGKVMSDLLPMRFLPSVIFTCILYFMLGLKKTVDAF-FIMMFTLIMV-AYTASSMA 524

  Fly   526 LLISSRLSLVNAMFMGPVLAVPLILLSIY-GIGYGGGTYISPLMRFLMHLSYLRHSMEGLVASLY 589
            |.|::..|:|:...:  ::.:..:.:.:: |:.....| |.|.:.:|.:.|..|:   |..|..|
Mouse   525 LAIATGQSVVSVATL--LMTIAFVFMMLFSGLLVNLRT-IGPWLSWLQYFSIPRY---GFTALQY 583

  Fly   590 D--YGRA---------DTICEDTEIFCSFKKSKVLLAFLGFENMHY-LW----SLSCLMSFYLLF 638
            :  .|:.         ::.|.::...|:   ....|...|.|...: ||    :|:|::   ::|
Mouse   584 NEFLGQEFCPGFNVTDNSTCVNSYAICT---GNEYLINQGIELSPWGLWKNHVALACMI---IIF 642

  Fly   639 TVAAYFMIRLRLKHS 653
            ...||..:....|:|
Mouse   643 LTIAYLKLLFLKKYS 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 87/236 (37%)
3a01204 67..654 CDD:273361 183/652 (28%)
ABC2_membrane 381..587 CDD:279410 56/215 (26%)
Abcg2NP_001342406.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
3a01204 46..651 CDD:273361 182/648 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831360
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.