DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and Abcg4

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:631 Identity:251/631 - (39%)
Similarity:361/631 - (57%) Gaps:63/631 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YLPSWPAVNLQFSELCYVVPDQTNASKT--KTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLA 107
            :||...||:::|.||.|.|.:.....|.  ||:|:.::|.|...||..|:|||||||:|.:|:||
Mouse    52 HLPKRSAVDIEFVELSYSVREGPCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILA 116

  Fly   108 GFGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLE 172
            |:......|:||||..||::|.|||||.||||.|:|....||||.|:::|||||.::..:|:  |
Mouse   117 GYRESGMKGQILVNGRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEKQEVKK--E 179

  Fly   173 VIDEILGMLRLKDTLNTMAQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLK 237
            ::.|||..|.|....:|....||||:||||.|||||||||||:|.||||:|||..|..|.::|:|
Mouse   180 LVTEILTALGLMSCSHTRTALLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMK 244

  Fly   238 VLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFI 302
            .||.|||||||:||.||||:|||.|.:|:|::|||:::|..:|::|:||..||.||..:||||||
Mouse   245 SLAHGGRTVICTIHQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFI 309

  Fly   303 IEVACLEYGGSYHEPMV-EAVGNGKVA----RWSP-----PA-----------VEGETTTTKTDT 346
            ||||..|||..  .||: .||.||...    :.||     ||           :|..|..|.|.|
Mouse   310 IEVASGEYGDL--NPMLFRAVQNGLCTMAEKKSSPGKNELPAHCPTCPPELDPIESHTFATSTLT 372

  Fly   347 TSGASSFYERDQFDEEISPKLLEAKCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVG 411
                                          |:.:|..|..:.:.||.....|:|..::::.:|:|
Mouse   373 ------------------------------QFCILFRRTFLSILRDTVLTHLRFMSHVLIGVLIG 407

  Fly   412 SLYFGMGTSASKALFNFGFMFTIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMV 476
            .||..:|..|||...|.||:|..::..::..:||.:|.||.|:.:..||:.|.||.|.:||.|..
Mouse   408 LLYLHIGDDASKVFNNTGFLFFSMLFLMFAALMPTVLTFPLEMAVFMREHLNYWYTLKAYYLAKT 472

  Fly   477 TSKLPSMFILAVIYLSIVYLMSSQPLEWFRFAMLFTIAFVTALTSDSFGLLI-SSRLSLVNAMFM 540
            .:.:|...:..|:|.||||.|:.||.|..||.:...:|..|||.:.|.|||| ::..||..|.|:
Mouse   473 MADVPFQVVCPVVYCSIVYWMTGQPAETSRFLLFSALAIATALVAQSLGLLIGAASTSLQVATFV 537

  Fly   541 GPVLAVPLILLSIYGIGYGGGTYISPLMRFLMHLSYLRHSMEGLVASLYDYGRADTICEDTEIFC 605
            |||.|:|::|.|.:.:.:   ..|...:::..:|||:|:..|||:.::|...|....|.|.:  |
Mouse   538 GPVTAIPVLLFSGFFVSF---KTIPTYLQWSSYLSYVRYGFEGLILTIYGMERGHLTCLDEQ--C 597

  Fly   606 SFKKSKVLLAFLGFENMHYLWSLSCLMSFYLLFTVAAYFMIRLRLK 651
            .|:..:::|..|..|..........|..|:|...:.||.::|.|:|
Mouse   598 PFRDPQIILRELDVEEAKLYMDFLVLGIFFLALRLLAYLVLRYRVK 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 120/226 (53%)
3a01204 67..654 CDD:273361 242/609 (40%)
ABC2_membrane 381..587 CDD:279410 74/206 (36%)
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 251/631 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831354
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.800

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