DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and abcx-1

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_495321.3 Gene:abcx-1 / 183860 WormBaseID:WBGene00006522 Length:710 Species:Caenorhabditis elegans


Alignment Length:772 Identity:150/772 - (19%)
Similarity:272/772 - (35%) Gaps:229/772 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SSDINADSLEPDQSED-----FQTVLG----------------------LKYLPSW--------P 50
            |.|:..::.|.|:|..     |.|:..                      ::||..:        |
 Worm     3 SEDVRIETPEDDESSGRDSIYFSTIRSRHAEHFFADMQNHNTQNEKKGIIRYLEYYEINSQSTRP 67

  Fly    51 AVNLQFSELCYVVPDQTNASKTKTILR---------RVNGMFHSHELTAIIGPSGAGKTTLLNLL 106
            ..||..::|.:  .....:|..|.:||         .::....|.::.||:....:...:||.::
 Worm    68 YPNLLLNKLSF--SKDLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMYTKESETISLLKII 130

  Fly   107 AGFGAVCE--SGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQ 169
            .|...|..  ||:||||.        .:|||..::..:   .|..||...        ..|:::|
 Worm   131 CGIKDVRGKLSGDILVNG--------HRMSRDRLEKTI---GFVSLESPT--------STLSVRQ 176

  Fly   170 KLEV------------------IDEILGMLRLKDTLNTMAQKLSGGERKRLCIALELVNNPPVIF 216
            .|.|                  |::::..|.|....:.:..:|:..:.:|:.:|.:||.:|.::.
 Worm   177 YLHVHGNFYPPMTERYGGVGHLINKLMTDLGLFPVSDIICSRLNRSQWQRVKVASQLVRDPTILV 241

  Fly   217 LDEPTTGLDDLSSSQC--IALLKVLAA-GGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKG 278
            ..:....:|  ...||  |..|:..|. ..|.||.:|...|.:|..|.....:||.|:.:|.|..
 Worm   242 CSDIFKDID--VHDQCFLIDYLREWAVKTNRIVIMAISPTSLQILNMFSKAMILASGRMIYFGPP 304

  Fly   279 SNIVPFLKNFGLCCPITYNPADFIIEVACLEYGGSYHEPMVEAV---GNGKVAR----WSPPAVE 336
            .::..:.:..|..||...|..|:.:::..       |:.:....   .:.::||    |:..|..
 Worm   305 KSMQQYFETIGCPCPPYKNVCDYYVDLVT-------HDNLTSDASRESSVRIARLVNKWNQTAPP 362

  Fly   337 GETTTTKTDTTSGASSFYERDQFDEEISPKLLEAKCSWWLQY------KLLLVRMLIQM------ 389
            ...|         ||..:..|.....|...||.....:|..:      ::..:..:..:      
 Worm   363 VRRT---------ASGKFLLDLPTAGIFMNLLTLISLFWFNFINNRASRIFFLLFIFSLSTCLSL 418

  Fly   390 -------------WRDKSYIKL------------------------KFYMNI-----VLALLVGS 412
                         ....||::|                        |||:.|     :..||..|
 Worm   419 HLSDLSLTLPDAFLNRNSYLELLIFYVPLFIGLVNLKKCTFLSEFDKFYLFISARHHLKELLKLS 483

  Fly   413 LYFGMGTSASKALFNF--GFMFTIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAM 475
            ....|.:|.|..:.:|  ...|.::.:.::  .||:.::             ..:::.||.:...
 Worm   484 PLKNMCSSLSIIIVSFVVELPFLLITSMVF--AMPMSIF-------------TDFHQKSSNHLTS 533

  Fly   476 VTSKLPSMFI-LAVIYLSI--VYLMSSQPLEWFRFAMLFTIAFVTALTSDSFGLLISSRLSLVNA 537
            :.|...|.|| |:|..|.:  |..:||:||.:|    .|.|::.:...:..|...|.|.|...|.
 Worm   534 LVSISSSFFINLSVTQLVVNSVSNLSSEPLSFF----FFVISWFSLFFACGFPFPIHSILKYFNP 594

  Fly   538 MFMGPVLAVPLILLSIYGIGYGGGTYISPLMRFLMHLS---YLRHSME-GLVASLYDYGRADTIC 598
            :|. |..:|                     .|||...|   |.:.|:. .....||..||  |..
 Worm   595 LFF-PTTSV---------------------FRFLYEDSPSLYPQLSVNLSTPIQLYSCGR--TFL 635

  Fly   599 EDTEIF---CSFKKSKVLLAFLGF-------ENMHYLWSLSCLMSFYLLFTVAAYFM 645
            ..|::.   |....|..||::.||       :::.:...:|..:..||.|::...|:
 Worm   636 NTTQVTRGPCQKVSSFELLSYYGFNESFDKQKSIFHGILISNFIFNYLFFSILILFV 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 56/256 (22%)
3a01204 67..654 CDD:273361 137/691 (20%)
ABC2_membrane 381..587 CDD:279410 48/262 (18%)
abcx-1NP_495321.3 P-loop_NTPase 102..302 CDD:304359 49/220 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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