DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and wht-2

DIOPT Version :10

Sequence 1:NP_608493.2 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_502164.1 Gene:wht-2 / 178069 WormBaseID:WBGene00007513 Length:610 Species:Caenorhabditis elegans


Alignment Length:663 Identity:185/663 - (27%)
Similarity:300/663 - (45%) Gaps:78/663 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METASSVKGSTTSQISSLQYSSDINADSLEPDQSEDFQTVLGLKYLPSWPAVNLQFSELCYVVPD 65
            :....|..|:..|.||:|:....:..                     :|..:::           
 Worm     9 LSVGQSEYGAAASMISALEAVDPVTL---------------------TWHNISI----------- 41

  Fly    66 QTNASKT-KTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLL--AGFGAVCESGEILVNNSPRDM 127
              :|.|: |.||..|:|:....:|.|::|.||||||||||:|  .....:..||.:.||..... 
 Worm    42 --HAEKSGKQILENVSGIAKPGQLLALMGASGAGKTTLLNMLLSRNLRGLETSGSVKVNGHELG- 103

  Fly   128 RVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKL-GKELNLKQKLEVIDEILGMLRLKDT-LNTM 190
            |....:|.|..|.::.....||.|.:.:.|.|:: |.....::::..:...||:.:.::| :.|:
 Worm   104 RGITAISGYAQQDELFVGTLTVKEYLDIQAKLRVNGDSEKRRRRVGNVMSQLGLYKCQNTRIGTI 168

  Fly   191 -AQK-LSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTP 253
             .|| :||||.:||..|.||::||.::|.||||||||...:...:.:|..||..||||||:||.|
 Worm   169 GGQKGISGGEMRRLTFACELLSNPSILFCDEPTTGLDSFMAESVVQVLSNLAKSGRTVICTIHQP 233

  Fly   254 SAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFIIEVACLEYGGSYHEPM 318
            |::::.|.|.|..:|.|:..:.|...:.:.|.::.|..||..:||||.||....:       .|.
 Worm   234 SSQLYLMFDRVMFMAGGKTAFLGSPRDAIQFFEDAGFACPRNFNPADLIIHTLAV-------MPN 291

  Fly   319 VEAVGNGKVARWSPPAVEGETTTTKTDTTS-GASSFYERDQFDEEISPKLLEAKCSWWLQYKLLL 382
            .|.....::          |...||...:| |.:..:..::.||...|. ...|.....|...||
 Worm   292 EEDKCRQRI----------EVIYTKFQNSSYGRTLKFGVEKSDEGQRPS-ERHKTGILTQIGALL 345

  Fly   383 VRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNF-GFMFTIVIAYLYLPMMPV 446
            .|..|..||:.|..:.|.....::.|.:|.||. .....|..:.|. |.:|.:|....|..:..:
 Worm   346 ERSAIDTWRNPSLTRAKVIQKSIMGLFIGLLYL-QSPLTSIGISNLNGALFYLVCELTYSTIFGI 409

  Fly   447 LLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLSIVYLM--SSQPLEWFRFAM 509
            |.:.|.:..|:.|||::..|.:.|||.|...|.||......:|.|.:.|.|  .|..:....:|.
 Worm   410 LNFLPADFPLVSREYHDGLYSVFSYYVARCLSYLPLFTADGLIMLLVSYWMVGFSSSITQVLYAC 474

  Fly   510 LFTIAFVTALTSDSFGLLISS-RLSLVNAM-FMGPVLAVPLILLSIYGIGYGGGTYISPLMRFLM 572
            |  |||:...:|.:.|::||. ..||..|| ..||:|.    |||:.|..|.....:...:.::.
 Worm   475 L--IAFLIEQSSSACGIMISCISPSLPIAMSTAGPMLT----LLSLTGGLYANVGALPSYISWIQ 533

  Fly   573 HLSYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKSKVLLAFLGFENMHYLWSLSCLMSFYLL 637
            :||:.|:..|....:.:    :....::|.|:...|:..| |:.|.|....:...|..:.:|.|:
 Worm   534 YLSWFRYGFEAFAINQW----SSVNEQNTTIWTDEKRDSV-LSQLSFRAEMFYPDLFIMSAFILI 593

  Fly   638 FTVAAYFMIRLRL 650
            |....|..:.||:
 Worm   594 FYTIGYAGLALRV 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_608493.2 3a01204 67..654 CDD:273361 178/597 (30%)
wht-2NP_502164.1 3a01204 44..610 CDD:273361 177/594 (30%)

Return to query results.
Submit another query.