DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and abch-1

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_495320.1 Gene:abch-1 / 174078 WormBaseID:WBGene00016973 Length:595 Species:Caenorhabditis elegans


Alignment Length:627 Identity:138/627 - (22%)
Similarity:246/627 - (39%) Gaps:112/627 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 ILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLAGFGAVCESGEI-LVNNSPRDMRVFRKMSRYIM 138
            ||:.::....|.|:.||:|.:.:||||||..|.. ||..:.|.| :::......|.|.|...:|.
 Worm    36 ILKNISFTATSGEIHAIVGVADSGKTTLLEALTS-GAGGDIGGIAMLDKFMLTRRRFNKFCSHIN 99

  Fly   139 QTDVLDSQFTVLEMMILAANLKLGKELNLKQKLEV---IDEILGMLRLKDTLNTMAQKLSGGERK 200
            ..:...|..:|..::...|.|.|.   :....||:   |.|:..|..:....:...:.||...|:
 Worm   100 YRNQYPSSLSVRSLLYYHARLCLS---STHTSLEIDHRISELSAMFDVIGYAHDKLEDLSFSARR 161

  Fly   201 RLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAG-GRTVICSIHTPSAKIFEMLDAV 264
            |:...:||:.:|.:..:|:||..|..||:.|.|..|...||. .|.:|.::....:.:..:|.:.
 Worm   162 RVMTVMELLKDPILTIIDDPTAYLSPLSAYQLIYALHFYAAKFNRIIIITLRNVRSDLSHLLGSA 226

  Fly   265 YVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFIIEVACLEYGGSYHEPMVEAVGNGKVAR 329
            ..|..|:..|.|:...:....|..|..||...|||.:.:.:..::     .|.|      .||..
 Worm   227 TCLFYGEVAYSGQMRLLPNHFKKAGFECPPNENPAAYYLSLLTID-----KESM------QKVME 280

  Fly   330 WSPPAVEGETTTTKTDTTS--------GASSFYERDQFDEEISPKLLEAKCSWWLQYKLLLVR-- 384
            ....|.:.....|..||:|        |.....:..:.:..||            ....:|.|  
 Worm   281 TQEKATKLVAFRTDNDTSSDISGSSATGTGVLLDSGRKNPSIS------------TVAAILFRRV 333

  Fly   385 -MLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMFTIVIAYLYLPMMPVLL 448
             .||......|...|     |...:....|.|...||...:||     |..::.:||| ::..::
 Worm   334 LSLIGSTPSNSLAGL-----IAFPVTAAVLSFLRPTSLPSSLF-----FWKLLTFLYL-LLQTIV 387

  Fly   449 YFP--TEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFIL------AVIYLSIVYLMSSQPLEW- 504
            .||  ::.:||.       :|..:.|....:..:.|:|.|      :.:::.||.        | 
 Worm   388 IFPNYSKTSLLS-------FRECNLYCQTTSLTIFSIFFLVYSCIQSSLFVGIVL--------WS 437

  Fly   505 FRFAMLFTIAF-VTALTSDSFGLLISSRLSLVNAMFMGPVLAVPLILLSIYGIGYG-GGTYISPL 567
            |:...:|.|:. :..|:..||.:.......|.|...:  |:...:|:|:.:..|.| .||..|..
 Worm   438 FKSEAMFQISLNLFLLSIFSFSIFTICARYLKNCSNI--VILQTIIILAFFVSGNGVTGTTTSSS 500

  Fly   568 MRFLMHL----SYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKSKVLLAFLGFENMHYLW-- 626
            :::.:.:    :|....:..|::|..|...           |:|......|:.....:::..|  
 Worm   501 IQYYIGVINPFNYSNFLLSKLLSSSIDNEE-----------CTFPSYMCKLSMNLHSDLYPPWYA 554

  Fly   627 ------SLSCLMSFYLLFTVAAYFM------IRLRLKHSEVS 656
                  :.:.|....|.|.|.::|:      ::|: ||.:.|
 Worm   555 PNDVFTNFAILFCLSLTFLVISFFIHLTEPSVQLK-KHMKQS 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 56/205 (27%)
3a01204 67..654 CDD:273361 137/623 (22%)
ABC2_membrane 381..587 CDD:279410 47/223 (21%)
abch-1NP_495320.1 P-loop_NTPase 18..238 CDD:393306 56/205 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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