DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and wht-4

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_494495.3 Gene:wht-4 / 173671 WormBaseID:WBGene00017179 Length:636 Species:Caenorhabditis elegans


Alignment Length:704 Identity:183/704 - (25%)
Similarity:315/704 - (44%) Gaps:124/704 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TASSVKGSTTSQISSLQYSSDINADSLEPDQSEDFQTVLGLKYLPSWPAVNLQFSELCYVVPDQT 67
            |.:|::.:|:.       |:.|..|:  .|.||.     |.|.: :|       |.|...|| |.
 Worm     5 TTASMRDATSK-------STMITVDT--GDGSEK-----GRKTI-AW-------SGLVATVP-QA 46

  Fly    68 NASKTKTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLAGF--GAVCESGEILVNNSPRDMRVF 130
            ...: |.::|.|:|:....|:.|::|.||||||||:|:||..  ..|...|::.||......:..
 Worm    47 GGGR-KEVIRNVSGVAEPGEVLALMGGSGAGKTTLMNILAHLDTNGVEYLGDVTVNGKKITKQKM 110

  Fly   131 RKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLEVIDEILGMLRLKDTLNTM----- 190
            |:|..|:.|.|:.....||.|.:...|:::: |...::||:|.::.:|..:.|.|..||:     
 Worm   111 RQMCAYVQQVDLFCGTLTVREQLTYTAHMRM-KNATVQQKMERVENVLRDMNLTDCQNTLIGIPN 174

  Fly   191 -AQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPS 254
             .:.:|.||:|||..|.|::.:|.::|.||||:|||...:|:.:..|..||..|:|:|..:|.||
 Worm   175 RMKGISIGEKKRLAFACEILTDPKILFCDEPTSGLDAFMASEVVRALLDLANKGKTIIVVLHQPS 239

  Fly   255 AKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFG--LCCPITYNPADFII------------EV 305
            :.:|.|...|..:|.|:.||.|....:.||....|  ...|.:||||||::            :|
 Worm   240 STVFRMFHKVCFMATGKTVYHGAVDRLCPFFDKLGPDFRVPESYNPADFVMSEISISPETEQEDV 304

  Fly   306 ACLEYGGSYHEPMVEAVGNGKVARWSPPAVEGETTTTKTDTTSGASSFYERDQFDEEISPKLLEA 370
            ..:||  ..||.....:|...:.:          |.|..|...|    |..|:.|.|     ...
 Worm   305 TRIEY--LIHEYQNSDIGTQMLKK----------TRTAVDEFGG----YGDDEDDGE-----SRY 348

  Fly   371 KCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMFTIV 435
            ..::..|:::||.|.|...:||...::::|...:..|:|||.:.:.:...........|.|:...
 Worm   349 NSTFGTQFEILLKRSLRTTFRDPLLLRVRFAQILATAILVGIVNWRVELKGPTIQNLEGVMYNCA 413

  Fly   436 IAYLYLPMMPVLLYFP------TEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLSIV 494
                  ..|..|.|||      :|:.:..||:.:..|.:.:|:.|...::||...||.:||.:|:
 Worm   414 ------RDMTFLFYFPSVNVITSELPVFLREHKSNIYSVEAYFLAKSLAELPQYTILPMIYGTII 472

  Fly   495 YLMSSQ---------------PLEWFRFAMLFTIAFVTALTSDSFGLLISSRLSLVNAMFMGPVL 544
            |.|:..               .|.|    :..:||:|.|......||:::         || |:.
 Worm   473 YWMAGLVASVTSFLVFVFVCITLTW----VAVSIAYVGACIFGDEGLVVT---------FM-PMF 523

  Fly   545 AVPLILLSIYGIGYGGGTYISPLMRFLMHLSYLRHSMEGLVASLYDYGRADTI--CE-------D 600
            .:|::   ::|..|.....|....:::..:|:.:|..|.|.|:  .:...|.|  |:       .
 Worm   524 VLPML---VFGGFYVNANSIPVYYQYVSFVSWFKHGFEALEAN--QWKEIDKISGCDLINPLNAT 583

  Fly   601 TEIFCSFKKSKVLLAFLGFENMHYLWSLSCLMSFYLLFTVAAYFMIRLRLKHSE 654
            |..:|.......:|...|.:...|...|...|||: ::.:.....:::|::.::
 Worm   584 TTGYCPASDGPGILTRRGIDTPLYANVLILFMSFF-VYRIIGLVALKIRVRFAK 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 79/232 (34%)
3a01204 67..654 CDD:273361 166/638 (26%)
ABC2_membrane 381..587 CDD:279410 52/226 (23%)
wht-4NP_494495.3 3a01204 49..636 CDD:273361 166/635 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156461
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2712
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.700

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