DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and abcg4

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_004916110.1 Gene:abcg4 / 101734071 XenbaseID:XB-GENE-22063023 Length:639 Species:Xenopus tropicalis


Alignment Length:610 Identity:244/610 - (40%)
Similarity:363/610 - (59%) Gaps:24/610 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YLPSWPAVNLQFSELCYVVPDQTNASKT--KTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLA 107
            :||...||:::|.:|.|.|.:.....|.  ||:|:.::|||.|.||..|:|||||||:||:|:||
 Frog    48 HLPKRSAVDIEFKDLSYSVREGPCWRKRGYKTLLKCLSGMFCSRELIGIMGPSGAGKSTLMNILA 112

  Fly   108 GFGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLE 172
            |:.....:|:||||...|::|.|||||.||||.|:|....||.|.|:::.||||.:::.:|:|| 
 Frog   113 GYRESGMTGQILVNGKQRELRTFRKMSCYIMQDDMLLPHLTVKEAMMVSTNLKLNEKMEVKKKL- 176

  Fly   173 VIDEILGMLRLKDTLNTMAQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLK 237
             ::|||..|.|.|...|....||||:||||.|||||||||||:|.||||:|||..|..|.::||.
 Frog   177 -VNEILTALGLLDCSGTRTLFLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLLN 240

  Fly   238 VLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFI 302
            .||.||||:||:||.||||:|||.:.:|:|::|||:|:|..::::|:||..||.||..:||||||
 Frog   241 SLAQGGRTIICTIHQPSAKLFEMFNKLYILSQGQCIYRGSVTHLIPYLKGLGLHCPTYHNPADFI 305

  Fly   303 IEVACLEYGGSYHEPMVEAVGNGKVARWSPPAVEGETTTTKTDTTSGASSFYERDQFDEEISPKL 367
            ||:|..|| |..:..:..||.:|..     |....::..||.|        .|....|..:..:.
 Frog   306 IELASGEY-GDLNPLLFRAVEDGLC-----PITRDKSQQTKLD--------QEHCPNDVSVHVES 356

  Fly   368 LEAKCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMF 432
            .....|...|:.:|..|..:.:.||.....|:|..::.:.:|:|.||..:|..|||...|.||:|
 Frog   357 HTFATSSLNQFCILFKRTFLSILRDTVLTHLRFMSHLCIGVLIGLLYLHIGDDASKVFNNTGFLF 421

  Fly   433 TIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLSIVYLM 497
            ..::..::..:||.:|.||.|:::..||:.|.||.|.:||.|...:.:|...:..|.|.||||.|
 Frog   422 FSMLFLMFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKTMADVPFQIVCPVAYCSIVYWM 486

  Fly   498 SSQPLEWFRFAMLFTIAFVTALTSDSFGLLIS-SRLSLVNAMFMGPVLAVPLILLSIYGIGYGGG 561
            :|||.|..||.:...:|..|||.:.|.||||. :..||..|.|:|||.|:|::|.|.:.:.:   
 Frog   487 TSQPPEVSRFLLFSALATSTALVAQSLGLLIGVASNSLQVATFVGPVTAIPVLLFSGFFVSF--- 548

  Fly   562 TYISPLMRFLMHLSYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKSKVLLAFLGFENMHYLW 626
            ..|...:::..::||:|:..||::.::|...||...|.  |:.|:|:..:.:|..|..|:.....
 Frog   549 KTIPTYLQWCSYISYVRYGFEGVILAIYGMDRAPLQCR--ELPCTFQLPQQVLQELDVEDAKLYV 611

  Fly   627 SLSCLMSFYLLFTVAAYFMIRLRLK 651
            ....|..|:|...:.||.::|.|:|
 Frog   612 DFLVLGGFFLGLRLLAYLVLRYRVK 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 120/226 (53%)
3a01204 67..654 CDD:273361 236/588 (40%)
ABC2_membrane 381..587 CDD:279410 73/206 (35%)
abcg4XP_004916110.1 3a01204 40..639 CDD:273361 244/610 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177791at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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