DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and abca10

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_031750511.1 Gene:abca10 / 100485734 XenbaseID:XB-GENE-6464279 Length:1610 Species:Xenopus tropicalis


Alignment Length:710 Identity:151/710 - (21%)
Similarity:265/710 - (37%) Gaps:192/710 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KTKTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLAGFGAVC--ESGEILVNN----SPRDMRV 129
            |....||.::...:..::||::|.||||||||||:|:|   :|  ..|...|.|    :.|.:..
 Frog   491 KNTEALRDLDLNIYEGQITALLGHSGAGKTTLLNILSG---MCPTSGGSATVCNYKLSNMRHLGE 552

  Fly   130 FRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLEVIDEILGMLRLKDTLNTMAQKL 194
            .:|...:..|.|:.....||.|.:.:.|.:   |.:..|:....:..:|..|::.|..|..|.||
 Frog   553 IKKRVGFCPQGDIKFDPLTVKENLTVFAMI---KGIPSKEVAHKVQTVLSDLQMNDIENIEASKL 614

  Fly   195 SGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAKIFE 259
            |||::::|...:.::.:|.|:.|||||.|||..|......:||...|...|::.:.....|.|  
 Frog   615 SGGQKRKLTFGIAILGDPQVLLLDEPTAGLDPCSRHNIWTILKESKADRVTLLSTQFMDEADI-- 677

  Fly   260 MLDAVYVLAEG--QCVYQGKGSNIVPFLK-NFGL----------CCPI----------------- 294
            :.|...|:::|  :||    |:::  ||| .:|:          .|.:                 
 Frog   678 LADRKVVISKGKLKCV----GTSL--FLKRKWGVGYHLRMQVSPSCDVELMTSIIKQHIPSTKLT 736

  Fly   295 -------TYN---------PADFI-----IEVACLEYGGS---YHEPMVEAVGNGKVARWSPPAV 335
                   ||.         |..|:     :..:.:.||.|   ..:..::..|.|::........
 Frog   737 TQNEEELTYTLPFENMDVFPDLFLHLDGQVGNSIVNYGVSMTTLDDVFLKLEGEGEIESGDYDVF 801

  Fly   336 EGETTTTKTDTTSGASSFYERDQFDEEISPKLLEAKCS-------W--WLQYKLLLVRM-LIQMW 390
            ..|:.|.:           :|:.|..|:...||:...|       |  |.|..|.:.|: |:::.
 Frog   802 NPESRTNE-----------DREDFSTEMEESLLQMSDSGNVTLSGWELWRQQVLAVARIRLLKLR 855

  Fly   391 RDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMFTIVIAYLYLPMMPVLLYFP---- 451
            .|     .|.:.:|:|.|:|.:|...:....|..:..|.........|...|...:..|:.    
 Frog   856 HD-----TKSFRSILLLLVVITLPPIIIIITSNIVNTFDAWELTPHLYFQSPRNRLNKYYTDLLI 915

  Fly   452 -------------------TEINLLKREYNNQWYRLSSYYAAMVTSKL-----------PSMFIL 486
                               .|:.::..||:.:..:   |..|:..|::           |..|..
 Frog   916 CNNTGSSIEDFVGAVKEQNIEVQVVNGEYDTETVK---YRGAIEVSQMEKGYNFTIVANPKAFNS 977

  Fly   487 AVIYLSIVYLMSSQPLEWFRFAMLFTIAFVTALTSDSFGLLISSRLSLVNAMFMGPVLAVPLILL 551
            ..:.|:|:   |:..|:..:.:..|.: :...:|:|...::....:||:..:....... |.|.:
 Frog   978 LPVLLNII---SNALLKILKVSGHFRV-WNHPITTDGTDIIFLPYMSLIFFIIFASAFC-PHIAM 1037

  Fly   552 SIYGIGYGGGTYISPLMRFLMHLSYLRHSMEGLVASLYDYGRA--DTICEDTEIFCSFKKSKVLL 614
            |            |.....:...:.||  :.||..|.|.:|:|  |.|                 
 Frog  1038 S------------STEDNRINARNQLR--ISGLFPSAYWFGQALVDVI----------------- 1071

  Fly   615 AFLGFENMHYLWSLSCLM--------SFYLLFTVAAYFMIRLRLKHSEVSPIFAYVIQLL 666
                     ..|.|..||        |:.||..|.|..||...:.:.....::.|||..:
 Frog  1072 ---------LYWILLFLMVAIYFAFNSYILLDFVPAMVMIIGIIGYGTAMVLYVYVISFI 1122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 65/212 (31%)
3a01204 67..654 CDD:273361 148/696 (21%)
ABC2_membrane 381..587 CDD:279410 39/240 (16%)
abca10XP_031750511.1 rim_protein <107..1597 CDD:130324 151/710 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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