DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nhe1 and Nha1

DIOPT Version :9

Sequence 1:NP_608491.3 Gene:Nhe1 / 33167 FlyBaseID:FBgn0026787 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_723224.2 Gene:Nha1 / 33961 FlyBaseID:FBgn0031865 Length:715 Species:Drosophila melanogaster


Alignment Length:568 Identity:116/568 - (20%)
Similarity:195/568 - (34%) Gaps:151/568 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 VICVIMLGILLIHSMLQTGFQYLPES---------IVVVFLGA--------------FIGLSLNV 148
            :|.:|::|:|:    ..|.|..:.:|         :||:.:.|              .||:.|..
  Fly   225 LISIILIGVLI----WVTAFVIIGDSAAPGGQLFGLVVLTVAANFGGYLISLTTLPRLIGMLLVG 285

  Fly   149 MSGQNGSWKR-EEVFSPMGFFL--VLLPPIIFESGYNLHKGNFFQNIGSILVFAIFGTTISALVI 210
            :..||..|.. :..||.:...|  ..|..|:..:|..:....|.:...:||...|....:.|:|:
  Fly   286 ILFQNVGWADIDGDFSKVTAHLRKFALTIILTRAGLEMEPEAFKKVYKTILKLGIIPWCVEAVVM 350

  Fly   211 GAGIYLLGLGEVAFRLSFSESFAFGSLISAVDPVATVAIFHALDVD--------PILNMLVFGES 267
            ....:.|      ..|.:..:|..||:|:||.|...|.....|...        |.|.:.|.|  
  Fly   351 AVMSHFL------LDLPWIWAFLLGSIIAAVSPAVVVPCLFRLRTKGYGVAKGIPTLVVAVAG-- 407

  Fly   268 ILNDAISIVLTASITQSANVNAEASTGEAMFS--------ALKTFCAMFFASAGIGVIFALISAL 324
             ::||:|:.:...|:            ..|||        |....|.:  ...|.||::..::.:
  Fly   408 -VDDALSVAIFGIIS------------TVMFSDKGLAYQIAQAPVCIL--GGLGFGVVWGSLARI 457

  Fly   325 LLKHIDLRKHPSLEFAMMLMFT---YAPYVLAE-GIHLSGIMAILFCGIVMSHYTHFNLSTVTQI 385
            ..:..|....|   ...:|:||   .|.|...| |...:|.:|::|...|.:.:...:...|...
  Fly   458 FPEKGDAYVVP---LRTLLLFTGGLMAIYGSEELGFEGAGPLAVVFSAFVSNLFWCKDGWDVEDN 519

  Fly   386 TMQQTMRTLAFIAETCVFAYLGLAIFSFK---HQVELSFVIWAIVLCLIGRACNIFP-------- 439
            .:.........|.|..:|...|..|...:   |.|.            ||.|| ||.        
  Fly   520 PVSTAFEIFWMIFEPILFGLTGATIKIRELDSHTVS------------IGAAC-IFTGAILRILT 571

  Fly   440 ---LAFLVNKFREHKINNKMQFIMWFSGL-RGAISYALS----LHLNLDSQEKRH---VIITTTL 493
               :||      ..::|.|.:|.:..|.: :..:..||.    .||..|:.|:..   .|:.|..
  Fly   572 TAGIAF------GDRLNTKEKFFVGLSWMAKATVQAALGPVALKHLGDDATEEERNWANIVQTIC 630

  Fly   494 IIVLFTTLVLGG------STMPLLKYLKPGKKRRARGSGRNAAEEGGRRNGSGRKRSKSISLSKT 552
            :..:..|..||.      .|..|.|..:|                   ::.||.:||...|:.  
  Fly   631 VFSIVLTAPLGAIMISVTGTKLLTKTKQP-------------------QDLSGWRRSHRPSIR-- 674

  Fly   553 REWGQAIDSEHLSELTEEEDVTFTQARDRFGRMDRKYFIPFFTRRFNS 600
                   |...:.|..|.||....:.::..........||..:..:|:
  Fly   675 -------DISIIDEEEEREDPEIPEDKETHDNTLNNAHIPSISYTYNT 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe1NP_608491.3 NhaP 100..515 CDD:223104 102/481 (21%)
Nha1NP_723224.2 Na_H_Exchanger 256..646 CDD:279355 92/434 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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