DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe1 and Slc9c1

DIOPT Version :10

Sequence 1:NP_608491.3 Gene:Nhe1 / 33167 FlyBaseID:FBgn0026787 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001008762.2 Gene:Slc9c1 / 288117 RGDID:1309075 Length:1181 Species:Rattus norvegicus


Alignment Length:459 Identity:104/459 - (22%)
Similarity:189/459 - (41%) Gaps:92/459 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HNSSLSLFFVICVIMLGILLIHSMLQTGFQYLPESIVVVFL----GAF----------------- 141
            ||..||..:        :.|:.|:..:..|.|||.|:::.|    |||                 
  Rat    12 HNVKLSNAW--------LDLLKSVFLSTPQDLPEIILILSLICTIGAFLNMHLKDFPIPLPVILF 68

  Fly   142 -IGLSLNVMSGQNG---------SWKREEVFSPMGFFLVLLPPIIFESGYNLHKGNFFQNIGSIL 196
             ||....::|..:.         .|     ..|..||.:..|.|||...:::......:....||
  Rat    69 LIGCCFEILSFASTQIQLYADAIQW-----MDPDMFFGIFTPVIIFNVAFDMDIYMLQKLFWQIL 128

  Fly   197 VFAIFGTTIS-ALVIGAGIYLLGLGEVAFRLSFSESFAFGSLISAVDPVATVAIFHALDVDPILN 260
            :..|.|..|: .|::.   ||..:.:::  |.......|.:::.:.||:.|.|....|.:...|.
  Rat   129 LITIPGFMINYTLILW---YLQSVNKLS--LKTIPWLLFSAVLISSDPMLTSASIRDLGLSRSLT 188

  Fly   261 MLVFGESILNDAISIVLTASITQ----SANVN---AEASTGEAMFSALKTFCAMFFASAGIGVIF 318
            .|:.|||:|...||:::.:::.|    |.::|   |......|....:::|......:..|.:..
  Rat   189 NLINGESLLTSVISLIIYSAVVQISFKSKHMNHTLAHKVMSTAWSYLVESFITGILITKAIQLWM 253

  Fly   319 ALISALLLKHIDLRKHPSLEFAMMLMFTYAPYVLAEGIHLSGIMAILFCGIVMSHYTHFNLSTVT 383
            |.|....:.||      :|.|:::.:..|    :.|.|.:|||..:...|:.::. |.|...  .
  Rat   254 ATIFGDDVNHI------TLIFSVLYLIFY----VCELIGMSGIFTLATIGLFLNS-TSFKPG--V 305

  Fly   384 QITMQQTMRTLAFIAETCVFAYLGLAI-------FSFK---HQVELSFVIWAIVLCLIGRACNIF 438
            :..:.:....|:||....||.::||.|       .||.   :.:.:.|.:  |||.|:     :|
  Rat   306 EAFLLEFWNCLSFIGFLMVFTFIGLLIPAHTYLYISFSDVYYSLNIYFTL--IVLRLL-----VF 363

  Fly   439 PLAFLVNKFREHKINNKMQFIMWFSGLRGA--ISYALSL---HLNLDSQEKRHVIITTTLIIVLF 498
            .|...:.....|..:.:..|||.:|.::|.  |:.||.|   .::|.|:.:|..|:...:.:.:.
  Rat   364 LLMSPILSRLGHGFSWRWAFIMVWSEMKGTPNINMALLLAYSDVSLGSERERSQILFHGVSVCVI 428

  Fly   499 TTLV 502
            |.:|
  Rat   429 TLIV 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe1NP_608491.3 Na_H_Exchanger 111..597 CDD:470090 100/446 (22%)
Slc9c1NP_001008762.2 NhaP 37..556 CDD:439796 95/426 (22%)
CAP_ED 893..1020 CDD:237999
Blue background indicates that the domain is not in the aligned region.

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