DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe1 and Slc9a4

DIOPT Version :9

Sequence 1:NP_608491.3 Gene:Nhe1 / 33167 FlyBaseID:FBgn0026787 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_006244800.1 Gene:Slc9a4 / 24785 RGDID:3721 Length:797 Species:Rattus norvegicus


Alignment Length:641 Identity:185/641 - (28%)
Similarity:301/641 - (46%) Gaps:130/641 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TTTDNSSSIHTVSDVFVNSPLGNVTPSISASGNASTTKRGNASTLVTDPPLIDSHAVEQEHNSSL 102
            |..:.||.::..|     ||.|..||....:.::|            ||         .|..|..
  Rat    22 TCLEASSYVNESS-----SPTGQQTPDARFAASSS------------DP---------DERISVF 60

  Fly   103 SLFFVICVIMLGI---LLIHSMLQTGF-------QYLPESIVVVFLGAFIGLSLNVMSGQNGSWK 157
            .|.:....|...:   :|:.|:.:.||       ..:|||.:::.:||.:|   :::.|.:  .|
  Rat    61 ELDYDYVQIPYEVTLWILLASLAKIGFHLYHRLPHLMPESCLLIIVGALVG---SIIFGTH--HK 120

  Fly   158 REEVFSPMGFFLVLLPPIIFESGYNLHKGNFFQNIGSILVFAIFGTTISALVIGAGIYLL----- 217
            ...|.....:||.|||||:.||||.:....||:||||||.:|..|..|:|..||..:|.:     
  Rat   121 SPPVMDSSIYFLYLLPPIVLESGYFMPTRPFFENIGSILWWAGLGALINAFGIGLSLYFICQIKA 185

  Fly   218 -GLGEVAFRLSFSESFAFGSLISAVDPVATVAIFHALDVDPILNMLVFGESILNDAISIVLTASI 281
             |||::    :..::..||||||||||||.:|:|....|:..|.|::|||::|||.||:||...:
  Rat   186 FGLGDI----NLLQNLLFGSLISAVDPVAVLAVFEEARVNEQLYMMIFGEALLNDGISVVLYNIL 246

  Fly   282 TQSANVNAEASTGEAMFSALKTF-----CAMF--FASAGI--GVIFALISALLLKHIDLRKHPSL 337
            .        |.|....|..::..     ||.|  ....|:  |:||..|||.:.:.  .:...::
  Rat   247 I--------AFTKMHKFEDIEAVDILAGCARFVIVGCGGVFFGIIFGFISAFITRF--TQNISAI 301

  Fly   338 EFAMMLMFTYAPYVLAEGIHLSGIMAILFCGIVMSHYTHFNLSTVTQITMQQTMRTLAFIAETCV 402
            |..::.||:|..|:.||.::||||:||..|.:.|..|...|:|..:..|::..|:.|:.::||.:
  Rat   302 EPLIVFMFSYLSYLAAETLYLSGILAITACAVTMKKYVEENVSQTSYTTIKYFMKMLSSVSETLI 366

  Fly   403 FAYLGLAIFSFKHQVELSFVIWAIVLCLIGRACNIFPLAFLVNKFREHKINNKMQFIMWFSGLRG 467
            |.::|::.....|:...:||.:.:..|.|.||.::|.|.::.|:||....:.|.|.|:::||:||
  Rat   367 FIFMGVSTVGKNHEWNWAFVCFTLAFCQIWRAISVFTLFYVSNQFRTFPFSIKDQLIIFYSGVRG 431

  Fly   468 AISYALSLHLNLDSQEKRHVIITTTLIIVLFTTLVLGGSTMPLLKYLKPGKKRRARGSGRNAAEE 532
            |.|::|:..|.|....::.:.:|.||::..||....|.:..||::||                  
  Rat   432 AGSFSLAFLLPLSLFPRKKLFVTATLVVTYFTVFFQGITIGPLVRYL------------------ 478

  Fly   533 GGRRNGSGRKRSKSISLSKTREWGQAIDSEHLSELTEE-----EDV----TFTQARDRFGRMDRK 588
                  ..||.:|.          ::|:.|....|.:.     |||    :..|.||:|.:.|.:
  Rat   479 ------DVRKTNKK----------ESINEELHIRLMDHLKAGIEDVCGQWSHYQVRDKFKKFDHR 527

  Fly   589 YFIPFFTRRFNSQELHECKSQMADLTNK--WYQAIRVSPLDSDESDEEIGLAASTS 642
            |......||      ::.||.:..|..|  ..|||.::         |.||.:|.:
  Rat   528 YLRKILIRR------NQPKSSIVSLYKKLEMKQAIEMA---------ETGLLSSVA 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe1NP_608491.3 NhaP 100..515 CDD:223104 143/439 (33%)
Slc9a4XP_006244800.1 b_cpa1 63..621 CDD:273294 170/574 (30%)
Na_H_Exchanger 73..476 CDD:279355 139/421 (33%)
NEXCaM_BD 569..675 CDD:293250 185/641 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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