DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe1 and pbo-4

DIOPT Version :9

Sequence 1:NP_608491.3 Gene:Nhe1 / 33167 FlyBaseID:FBgn0026787 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_509830.2 Gene:pbo-4 / 181285 WormBaseID:WBGene00003943 Length:783 Species:Caenorhabditis elegans


Alignment Length:585 Identity:164/585 - (28%)
Similarity:277/585 - (47%) Gaps:107/585 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 VEQEHNSS------------------LSLFFVICVIMLGILLIHSMLQTGFQYLPESIVVVFLGA 140
            |..||:.|                  |:|||:  ||.|..|:.|....|. :.||||..::|:|.
 Worm    84 VGNEHDESHGISVVSWHWDYVKNELVLTLFFI--VIGLFKLVYHHTFVTR-KILPESCCLIFIGI 145

  Fly   141 FIGLSLNVMSGQNGSWKREEVFSPMGFFLVLLPPIIFESGYNLHKGNFFQNIGSILVFAIFGTTI 205
            .||... |....:.|.|..| |....||..||||||.||.|:|....|.:|||:||::|:.||.:
 Worm   146 AIGFFF-VGDATHASIKFLE-FKSKVFFFYLLPPIILESAYSLKDRAFIENIGTILLYAVVGTIL 208

  Fly   206 SALVIGAGIYLL---G-LGEVAFRLSFSESFAFGSLISAVDPVATVAIFHALDVDPILNMLVFGE 266
            :.:::.|.:.:|   | :|:  :.||..:...|.||::||||||.:|:|..:.|:.:|..:||||
 Worm   209 NIVLLAAALLILIWVGIMGK--YNLSVMDILTFASLVAAVDPVAVLAVFQEVGVNKMLYFMVFGE 271

  Fly   267 SILNDAISIVLTASITQSANVNAEAST--------GEAMFSALKTFCAMFFASAGIGVIFALISA 323
            |:.|||::||       ..|:..|..|        |   |..|.:|..:......||:|...||:
 Worm   272 SLFNDAVTIV-------CYNLAIEFQTLPDFTWYHG---FLGLLSFLCVSIGGLIIGLICGAISS 326

  Fly   324 LLLKH-IDLR-KHPSLEFAMMLMFTYAPYVLAEGIHLSGIMAILFCGIVMSHYTHFNLSTVTQIT 386
            .:.|. .|:| ..|.:.|.|    .|..|:.:|..|.|||:|::.||:..:||...|:|..:..:
 Worm   327 FVTKFTTDVRVVEPVVLFGM----AYLAYLGSEMFHFSGIIALIACGLFQTHYACCNISYKSFTS 387

  Fly   387 MQQTMRTLAFIAETCVFAYLGLAIFSFK-------HQVELSFVIWAIVLCLIGRACNIFPLAFLV 444
            :....:..:.:.|:.:|..||:.:.:.:       |.|   |...::|||::.|....|.|.:.|
 Worm   388 VMYITKVCSTLCESLIFIILGVMLVNEREWFWTDWHPV---FSAVSVVLCVVVRFGVTFFLTYFV 449

  Fly   445 NKFR---EHKINNKMQFIMWFSGLRGAISYALSLHLNLDSQEKRHVIITTTLIIVLFTTLVLGGS 506
            |:|.   .| |:.:.||||.:.|||||:|::|...::.:...| :.::..|..::|||.::.|.:
 Worm   450 NQFTGGVRH-ISFQEQFIMSYGGLRGAVSFSLVFMISANPDVK-NTMLGATYAVILFTNIIQGST 512

  Fly   507 TMPLLKYLKPGKKRRARGSGRNAAEEGGRR------NGSGRKRSKSISLSKTREWGQAIDSEHLS 565
            ....:|:|          :.|.|.:|...|      ||..:..|:.|                 .
 Worm   513 IKLFVKWL----------NIRLAKKEDHFRLFIEFNNGMVQHLSQGI-----------------E 550

  Fly   566 ELTEEEDVTFTQARDRFGRMDRKYFIPFFTRRFNSQELHECKSQMADLTN--KWYQAIRVSPLDS 628
            :|..::.::..   :|...:.:||..|...:.:.:.:..: :.::.:|..  ...:|:..||..|
 Worm   551 DLCGDKSLSLI---NRMSELSKKYVRPLLEKNYTANKAKK-EGKLVELNRAVAMREALNNSPSQS 611

  Fly   629  628
             Worm   612  611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe1NP_608491.3 NhaP 100..515 CDD:223104 142/456 (31%)
pbo-4NP_509830.2 Na_H_Exchanger 115..519 CDD:279355 136/429 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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