DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe1 and nhx-5

DIOPT Version :9

Sequence 1:NP_608491.3 Gene:Nhe1 / 33167 FlyBaseID:FBgn0026787 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001024720.1 Gene:nhx-5 / 181258 WormBaseID:WBGene00003733 Length:630 Species:Caenorhabditis elegans


Alignment Length:646 Identity:185/646 - (28%)
Similarity:303/646 - (46%) Gaps:144/646 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SSIHTVSDVFVNSPLGNVTPSISASGNASTTKRGNASTLVTDPPLIDSHAVEQEHNSSLSLFFVI 108
            |:|..:|.....|..||....::|...||...|.:...|:|                      .:
 Worm     8 STILLISSTVAGSNNGNTRLDMAAQRRASNIHRMDTIILLT----------------------YV 50

  Fly   109 CVIMLGILLIHSMLQTGFQYLPESIVVVFLGAFIG-----LSLNVMSGQ---------------- 152
            .|::|.::...:.....|:::.||.|.:|.|..||     ..|.::..|                
 Worm    51 SVMVLIVVTAWAFKHYRFRFIHESGVTLFYGLLIGFVIRYFGLGLLQSQTFDVITKNKTIVKEPP 115

  Fly   153 ----------NGS-----------------------WKREEVFSPMGFFLVLLPPIIFESGYNLH 184
                      .||                       .:::.||||..||.:|:|||||.:||:|.
 Worm   116 DYLMLEVKPEGGSRVSFHYELIEGFFADKRKKIEQQIEQKSVFSPEVFFNMLIPPIIFNAGYSLK 180

  Fly   185 KGNFFQNIGSILVFAIFGTTISALVIG------AGIYLLGLGEVAFRLSFSESFAFGSLISAVDP 243
            |.:||:||||||.....|||||....|      ..|:.:|       .||.|...||:||||.||
 Worm   181 KRHFFRNIGSILAIVFIGTTISCFGTGCLMFVFTSIFQMG-------YSFKELLFFGALISATDP 238

  Fly   244 VATVAIFHALDVDPILNMLVFGESILNDAISIVLTASITQSANVNAEASTGEAMFSALKTFCAMF 308
            |..:::|:.::|:..|..|:||||.||||::||| :.:.::.:.::||.|.:...||:..|..:|
 Worm   239 VTIISVFNDMNVEADLFALIFGESALNDAVAIVL-SEVIENFSTSSEAITLQDFGSAIAGFAGVF 302

  Fly   309 FASAGIGVIFALISALLLKHIDLRKHPSLEFAMMLMFTYAPYVLAEGIHLSGIMAILFCGIVMSH 373
            |.|..:|.:...::|.|.|...:.:|..||.::.::.:|..:::||...|:||:::|||||..:|
 Worm   303 FGSLMLGFMIGCMNAFLTKMTLISEHALLESSLFVLISYISFLVAEVCGLTGIVSVLFCGIAQAH 367

  Fly   374 YTHFNLSTVTQITMQQTMRTLAFIAETCVFAYLGLAIFSFKHQ-VELSFVIWAIVLCLIGRACNI 437
            ||:.|||..:|...:.....::||.|:.:|.|:|:::|...:| ...||::::::.....||..:
 Worm   368 YTYNNLSDESQSNTKHFFHMVSFIMESFIFCYIGVSVFVTNNQRWSFSFLLFSLISITASRALFV 432

  Fly   438 FPLAFLVNKFREHKINNKMQFIMWFSGLRGAISYALSLHLNLDSQEKRHVIITTTLIIVLFTTLV 502
            :||::|:|..|..||..:.|.::.|:|||||:::||:....  |.|.|.:|..||..:|:.|.||
 Worm   433 YPLSWLLNIRRRPKIPKRYQHMILFAGLRGAMAFALAGRNT--STENRQMIFATTTAVVIVTVLV 495

  Fly   503 LGGSTMPLLKYLKPGKKRRARGSGRNAAEEGGRRNGSGRKRSKSISLSKTREWGQAIDSEHLSEL 567
            .||.|..::.||:       ...|::|.||       |::...|:|.|..        .:| |:|
 Worm   496 NGGLTSWMIDYLQ-------IKHGKDAIEE-------GQRLENSMSSSPA--------DQH-SDL 537

  Fly   568 TEEEDVTFTQARDRFGRMDRKYFIPFFTRRFNSQELHECKSQMADLTNKWY--QAIRVSPL 626
            .|...||.:...:.:.    |.|:|                      .|||  .|..:.||
 Worm   538 DESVPVTMSPGLNPWD----KAFLP----------------------RKWYHFDASFMKPL 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe1NP_608491.3 NhaP 100..515 CDD:223104 149/475 (31%)
nhx-5NP_001024720.1 NhaP 152..470 CDD:223104 121/325 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D242793at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100371
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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