DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nhe1 and nhx-2

DIOPT Version :9

Sequence 1:NP_608491.3 Gene:Nhe1 / 33167 FlyBaseID:FBgn0026787 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_495614.4 Gene:nhx-2 / 174242 WormBaseID:WBGene00003730 Length:644 Species:Caenorhabditis elegans


Alignment Length:580 Identity:153/580 - (26%)
Similarity:273/580 - (47%) Gaps:77/580 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 EQEHNS----------SLSLFFVICVIMLG---ILLIHSMLQTGFQYLPESIVVVFLGAFIGLSL 146
            |:|:.|          ::.:...||:.::|   ..:|.:::....:..|:|.:::.:|..||:..
 Worm    29 EKEYPSRYPIAYFEWENVKIPMTICLWLIGASIAKIIFNLIPHLNELFPDSALLIMIGLIIGIIF 93

  Fly   147 NVMS-GQNGSWKREEVFSPMGFFLVLLPPIIFESGYNLHKGNFFQNIGSILVFAIFGTTISALVI 210
            .::. .:|..:...||     |.|.||||::|::||.:....||.|.||||.||:.||:.:.:.|
 Worm    94 KLIGVNKNAFFLESEV-----FMLYLLPPLVFDAGYFMPARQFFDNFGSILCFAMIGTSFNIVAI 153

  Fly   211 GAGIYLLGL-GEVAFRLSFSESFAFGSLISAVDPVATVAIFHALDVDPILNMLVFGESILNDAIS 274
            ...::.:.| |..:..........|||:.:.|||||.:.||..|.|:.:|.:.|||||:|||.::
 Worm   154 ALSLWAISLTGLFSVETPLMHMLLFGSVAADVDPVAVIVIFEELKVNEVLFIAVFGESLLNDGVA 218

  Fly   275 IVLTASITQSANVNAEASTGEAMFSALKTFCAMFFASAGIGVIFALISALLLKHIDLRKHPSLEF 339
            :||.......:.:..|........:...:|..:.|...|||::||.:::|:.:.....:...|..
 Worm   219 VVLYRMFLTFSEIGTENLITSDYINGGVSFLVVAFGGIGIGLLFAFLTSLVTRFARDEEVKVLNS 283

  Fly   340 AMMLMFTYAPYVLAEGIHLSGIMAILFCGIVMSHYTHFNLSTVTQITMQQTMRTLAFIAETCVFA 404
            ..:|:..|..|:..|...||.||||:|||..|..|...|:...|....:..::.|:..:||.:|.
 Worm   284 VFILILPYTCYLCGELFGLSSIMAIVFCGAAMRQYCRENVDPDTVKATESFIKVLSLASETVIFV 348

  Fly   405 YLGLAIFSFKHQVELSFVIWAIVLCLIGRACNIFPLAFLVNKFREHKINNKMQFIMWFSGLRGAI 469
            :|||:..|..|..:.||::..:|.|||.|...:..:.:.:||:|.:|.....||||.:.||||||
 Worm   349 FLGLSTVSSNHHWDTSFIVLTVVFCLIYRTLGVVVMCYFLNKYRLNKYTKVDQFIMAYGGLRGAI 413

  Fly   470 SYALSLHLNLDSQEKRHVIITTTLIIVLFTTLVLGGSTMPLLKYLKPGKKRRARGSGRNAAEEGG 534
            :|.|.:.:. |....:::.:|:.:|::.||..:.|.:..|:.::|:..||               
 Worm   414 AYGLVVAIP-DFIPGKNMFVTSCIIVIYFTVFLQGITLKPIAEFLQVEKK--------------- 462

  Fly   535 RRNGSGRKRSKSISLSKTREWGQAIDSEHL-SELTEE-----EDVTFTQA----RDRFGRMDRKY 589
                  ...||::             .||: |||.:.     ||:...:.    ||.:..::..|
 Worm   463 ------NVHSKNM-------------IEHIYSELIDTTMAGMEDIAGFKGHHWIRDSWNALNNNY 508

  Fly   590 FIPFFTRRFNSQELHECKSQMADLTNKWYQAIRVSPLDSDESDEEIGLAASTSQIHLTRS 649
            ..|....:.|.:|:.:.|     |..|:...:       ||..::|......|.:..|::
 Worm   509 LRPILVNKNNMKEMDKTK-----LVRKYKHLV-------DEDAKKIARGDLNSNMVFTKA 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe1NP_608491.3 NhaP 100..515 CDD:223104 125/429 (29%)
nhx-2NP_495614.4 Na_H_Exchanger 103..455 CDD:279355 114/357 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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