DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zir and dock4

DIOPT Version :9

Sequence 1:NP_608489.2 Gene:Zir / 33165 FlyBaseID:FBgn0031216 Length:2064 Species:Drosophila melanogaster
Sequence 2:XP_005170755.1 Gene:dock4 / 566115 ZFINID:ZDB-GENE-120703-34 Length:1925 Species:Danio rerio


Alignment Length:2201 Identity:389/2201 - (17%)
Similarity:688/2201 - (31%) Gaps:853/2201 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PSLCGSSISPTEPLD--YEEFLSQHMNIINRDPLKHILDFPQGDVTVK------------IIPRK 85
            |...|.::...|..:  |..|::::.|:      |.|  ||...:.:|            :||  
Zfish    26 PLEIGDTVQILEKCEGWYRGFITKNPNV------KGI--FPSSYIHLKNAHVKNKGQFETVIP-- 80

  Fly    86 IRTVDHVVPN-----------------ENLSDLPHHVQECVNCYTRPWKVVEYAQR----HLSS- 128
              |.|.|:..                 .|..||.|.:...:|      :::|..|:    ||:. 
Zfish    81 --TEDSVITEITMTLRDWGTMWKQLYMRNEGDLFHRLWHVMN------EILELRQQVLVGHLTHD 137

  Fly   129 -----SCYIRERIDRGTISPSAYQQEFEIDKDFSSFEEAFAYKSESCTPSSRQSIASLASVSSCT 188
                 ..:|..|:|.|       .::..:|                                   
Zfish   138 RLSDIKQHITARLDWG-------NEQLGLD----------------------------------- 160

  Fly   189 DTLTPRGSWASFDLRRSVNDPLIPNLLDNVPPEHIDQSNEARRQQDRQMALFSLYPESEAEENIE 253
              |.||..::..|    .:|..|..|...:...|      .||:...|.:|..|:.:.:      
Zfish   161 --LVPRRDFSMVD----PDDISITELYRLMERRH------RRREAPPQASLHHLFLQMK------ 207

  Fly   254 RRLLAEIPVEHMGHRIQVNCLQLRLELEVEPIFASMAIYDAKERQKISENFYFDMNADSL-KRML 317
                              :.:...|..|:|..|   ::||::|.:.|||.|:..:|...| |...
Zfish   208 ------------------SMMSSSLGEELEVFF---SVYDSREMRPISERFFVRLNKQGLPKSPE 251

  Fly   318 SSHVQC---ADI-STQSHSAIFEISYPSNDLFLVIRLEKVLQGDINNSVEPYLKEDKDKYREKVK 378
            .:..||   .|: |:.....::.:::       :.|:.:::.|:                 :|..
Zfish   252 KTERQCTLFVDLGSSDLRKDVYVVAH-------IFRIGRMVAGE-----------------KKNV 292

  Fly   379 SNAVDYCERLGKYRMPFAWTGIYLTNVFNGD------------NFESK-----DAGAAERDSFGN 426
            ||.        :|:.|:....|.:.::...|            |.||:     |:...:..|..:
Zfish   293 SNT--------QYKRPYGCAVISVADLLTADFKDDHLLKIYSCNAESEWYQIHDSIIRKVSSRYS 349

  Fly   427 ACGSSLGTAPSSNSLDRKSSTSSFDQLRRKANDMSGTLTRRGSLERKEKHRSWSPDDFANVVENF 491
            ..||:.|...|...|.     ...:|:|:   |.....||..|:.::.        .|::::   
Zfish   350 HIGSNTGLNVSLQLLH-----GDMEQIRK---DYMRLFTRNVSITKRL--------GFSDII--- 395

  Fly   492 RPITITVPSFFKQEADKMKDEDLYKILPELKRPSSVMKKYKCIPGSIKLEISPCVEEAKNALTPE 556
                                                      |||.:                  
Zfish   396 ------------------------------------------IPGEM------------------ 400

  Fly   557 LAPINPQSADNVRPVKEILEFPQSAIYNPHYSYRNLLFVSPKELNFSSRAGS-ARNIAVRVQLMA 620
                                             ||.|:|:.:...|.....| |||:.|.|.|:.
Zfish   401 ---------------------------------RNDLYVTLERGEFEKGGKSVARNVEVTVYLLG 432

  Fly   621 --GETPKDAVNAIYGKSSCPKFSTEAFTAVNYHNKCPSFYDEIKIALPASIKQHHHLLFTIYHVS 683
              |:..|..|....|:...    .|..:.|.||:..|.:.::||:.:|..:.:..||.|.:.|.|
Zfish   433 ADGQLLKGLVCCGSGEPGV----DEHHSFVLYHSNSPRWAEQIKLPIPLEMFRGTHLRFELRHCS 493

  Fly   684 CQKKPQDLQPSVETPIGYTWLPLL-EDGK-LKFGEFNLPV--------------MVESPPENYSF 732
            .::|.:      :...|::::||: :||: |..|...|.|              .::.|....|.
Zfish   494 TKEKGE------KKLFGFSFVPLMQDDGRPLPDGTHELIVHKCEETADLQDLARYLKLPFSKASL 552

  Fly   733 IPPNVHLPGIKWLDNHRAVFSINVEAVTAIHTLDSFLDRFFLICEYLDTRNIPSHIGENNIETEL 797
            .|.|                         ..|:.:..:.|::......|:     :.:|....:|
Zfish   553 QPGN-------------------------NQTIKNSKESFWIQSSLCSTK-----LTQNGDMLDL 587

  Fly   798 KK----------CLLDIEYANREPLVRHLPLVLDKLIELLVVTHKVGGQAMSLGSTVFEVLCLVS 852
            .|          ||..::..:...:|:.|...||.|..:|      .......|..||:  ||| 
Zfish   588 LKWRVHPDRIIDCLSKLKDIDGTEIVKFLQDTLDTLFGIL------DESPQRYGLKVFD--CLV- 643

  Fly   853 SLLSILNDDQYDQYGRQSLLSTYV--HFQCKIPHPFQSKQRLTCSRSTTEDLQLSESYTIYDNVL 915
            .::::|.|.::..:  :.::..|:  ||...:              |..:.:::.:.|       
Zfish   644 HVINLLQDSKFQLF--KPVMDNYIENHFAGAL--------------SYRDLIRVLKWY------- 685

  Fly   916 ASGRSLDRKELSIDVLHSMAARDVQVRLLHEELALHWVVASGKAADLAMSNSWFLFELIVKSMIE 980
                 :||   .||..|....:.|                        :..|.:||:.||:|  .
Zfish   686 -----VDR---IIDAEHQEQIQQV------------------------LKASEYLFKYIVQS--R 716

  Fly   981 HLHCSNTLNGPRKHRFPHQFNDDLSTLVHLVTTKVVGYHSNEPKLAQSLNASLGFFI--FDILSI 1043
            .|:.:.| .|..:..|....: :|...:||       :.|:|.|....:..:...|:  |..:|.
Zfish   717 RLYAAAT-GGQNEEEFRCSVH-ELFKSIHL-------FLSHESKGISPITHTQAVFLRSFPTVSC 772

  Fly  1044 MDRGFVFGLIKTYTKVLISKNASIPDLMNYKIDFLRIVCSHEHFVALNLPFGTSYTMVTAPCSP- 1107
                   .|:|.:         |:.::.|...|.|.           :||   :.|....|..| 
Zfish   773 -------ELLKIF---------SMREVANVARDTLN-----------SLP---TLTHTDCPLQPV 807

  Fly  1108 --------TPSTTSSNSQTSCGSLE---RALHADLSQE------------FLQQHF--------- 1140
                    ..|...:|:::.|..|.   |.||..|.::            .|..|.         
Zfish   808 KLQCMAKTVESPLYTNTESRCVLLPVVLRLLHTHLQEQRELVLCANILSSMLTLHTPATDCGVSD 872

  Fly  1141 LVGLVLSDLAAV-----MEVPN-PQLHGKAIRCIRNLMTSHDLDARYSETDARARVAALYIPLLS 1199
            .|.||:..|:.|     :||.| ||....::|            .:|.  |......|..:.||.
Zfish   873 EVNLVMESLSGVLLRTILEVTNRPQPSASSLR------------LQYQ--DVTGEFVACLLTLLR 923

  Fly  1200 IVMDCIPQLHQHGLEQDRLQQIGQLEDYQGPHQTITASTINPEVAFAISGSRPYSYLNEQVKNKL 1264
            .:.|                     ::||                              |:.::.
Zfish   924 QLKD---------------------KEYQ------------------------------QLLSRF 937

  Fly  1265 PLSSENTRHLLVCFLWVLKNLERNVLYRWLM--DLSPHRVHQM-LQGVNVCLKTFEYTGQKNVAT 1326
            |...|.|..||..|          .::|.|:  |:.|.....| |...||.:.|..|        
Zfish   938 PTKDELTSFLLQLF----------TVFRILIRPDMFPKDWTVMRLVANNVIITTILY-------- 984

  Fly  1327 LKRTNTQSFRKTGSTDVKEKLE---------ECIRGTNS--ARYDLINRRKDRNSTEKFRWRKDQ 1380
            |..|...||       :.||.:         .||...|.  .:.::....|.:...||:      
Zfish   985 LSDTLRNSF-------LNEKFDFKVWESYFYLCIIFINQPCLQLEMFPPSKRKKVLEKY------ 1036

  Fly  1381 MPYRSQYADAVGKSEHELELSHFIEGSLATEVALVLLDTLEIIVHAAANLYHNLLGTVLKVLLHS 1445
                                     |.:...:...:....:.:.....||...|:|..::|.|..
Zfish  1037 -------------------------GDMRVMIGCEIFSMWQHLGDYKLNLIPTLIGPFMEVTLVP 1076

  Fly  1446 LSRNQSVLALQNLFASQRALIFKFPNLLFDDETDICADLCLILLKHCGSLLPGIRSQAAASLYLL 1510
            ....::||               .|  :|.|..|            |.....|            
Zfish  1077 QMDLRNVL---------------IP--IFHDMMD------------CEQRRSG------------ 1100

  Fly  1511 MRQNFEIGNNFARVKMQVTMSLSSLVGTSSVFSEQSLRRALKTVLVYAESDSDLQDTSFPEQVQD 1575
                     ||.:|:.::...|..|:....  .:::.|.....::.                   
Zfish  1101 ---------NFKQVEAKLIDKLDGLMSEGK--GDETYRELFNNIIP------------------- 1135

  Fly  1576 LLFNLHMILSDTVKMKEYQED-----------PEMLLD--------------------LMNRIAK 1609
             ||..:..|...::.:.::|.           .|.|||                    |:| ..|
Zfish  1136 -LFGPYPSLLKKIERETWRESGVSHIATVTRLMERLLDYRDCMKIGEVDGKTMGCTVNLLN-FYK 1198

  Fly  1610 GYQNNPDLRLTWLENMAKKHRERANHTEAAMCYVHAASLVS-------EYLSM-LESQKHLPVGA 1666
            ...|..::.:.::..:.:.|.:..|:|||:...:....|:.       |:||. ::|:       
Zfish  1199 TELNKEEMYIRYIHKLYELHLKAQNYTEASYTLLLYDELLEWTERPLREFLSYPMQSE------- 1256

  Fly  1667 VSFQRISPNTLMESAVSDDVLSPGEDGICLGNHFTETGLKALLEEASNSFQVAGMYEAMNEVYKI 1731
              :||       :..:...::...:.|.|..|..      .|..|.:|.:               
Zfish  1257 --WQR-------KECLHLTIIHNFDRGKCWENCI------ILCRELANQY--------------- 1291

  Fly  1732 LIPICEANRDFQKLSKVHGKLQEA--FNRISQLQGKRVFGTYFRVGFYGGKFG-DLDQQEFIYKE 1793
                 ||..|::.|||:  ::.||  :::|...|  |:...:|||||||.||. .|..:||:.: 
Zfish  1292 -----EAYYDYRNLSKM--RMMEASFYDKIMNQQ--RLEPEFFRVGFYGKKFPFFLRNKEFVCR- 1346

  Fly  1794 PTLTKLPEIFSRLQNFYTERFGPDSVHII--KDSNTVDINSLDPDKAYIQITYVEPYFETYEMRH 1856
                  ...:.||:.| .:|...:..|.|  :.:|..|......|..|:||..|.|..|..::..
Zfish  1347 ------GNDYERLEAF-QQRMLSEFPHAIAMQHANQPDQTIHQADAQYLQIYAVSPVPENQDVLQ 1404

  Fly  1857 RE-------TYFERNFNIKRFIYATPFTKNGK-AHGELNEQCKRKTILTTANHFPYVKTRIMVIS 1913
            |:       ::::.| :|.||.|..||.|..| ...|.......:|.||.|...|.:.....|..
Zfish  1405 RDGVPNNIKSFYKVN-HIWRFRYDRPFHKGTKDKENEFKSLWVERTTLTLAQSLPGISRWFEVEK 1468

  Fly  1914 RQQIVLEPIEVAIEDIQKKTLEL----AAATNQEPADPKILQMVLQGCIGTTVNQGPMEMASVFL 1974
            |:.:.:.|:|.|.|.|:.|||:|    |....::..:...|.|.|.|.|...||.|.......|.
Zfish  1469 RELVEMSPLENASEVIENKTLQLRTLIAQCQMRQMLNINPLTMCLNGVIDAAVNGGLARYQEAFF 1533

  Fly  1975 ------SNLSDGTTVPTKHQNKLRLCFREFSKRCADALKKNRNLILSDQKDYQREL 2024
                  ::..||..:     .:||....|.:......|..:...:..|.|...::|
Zfish  1534 AKDYIANHPEDGEKI-----TRLRELMFEQAHILEFGLAVHEKFVPQDMKPLHKKL 1584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZirNP_608489.2 DUF3398 59..151 CDD:288711 24/130 (18%)
C2_Dock-C 589..769 CDD:176078 44/198 (22%)
DHR-2 1549..2037 CDD:284365 114/538 (21%)
dock4XP_005170755.1 SH3_DOCK4_B 10..65 CDD:212982 10/46 (22%)
DOCK_N 69..392 CDD:292790 75/461 (16%)
C2_Dock-B 400..584 CDD:176077 47/274 (17%)
DHR2_DOCK 1205..1595 CDD:297424 102/440 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583548
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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