DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11374 and Lgals1

DIOPT Version :9

Sequence 1:NP_608488.3 Gene:CG11374 / 33163 FlyBaseID:FBgn0031214 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_063969.1 Gene:Lgals1 / 56646 RGDID:69355 Length:135 Species:Rattus norvegicus


Alignment Length:137 Identity:32/137 - (23%)
Similarity:52/137 - (37%) Gaps:32/137 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RPGLCFVFHGMILMACEHFVIDFLTKQGSEICEECDVLLQIGSRL----PQNYITRNSRLKGKWG 102
            :||.|....|.:....:.||:: |.|..:.:|      |....|.    ..|.|..||:..|.||
  Rat    13 KPGECLKVRGELAPDAKSFVLN-LGKDSNNLC------LHFNPRFNAHGDANTIVCNSKDDGTWG 70

  Fly   103 PEENSSYLTFQLNRGKSFWMQILLTEECFFIS--------VNGYHFAKYFHRMPYRWLEAVDVLG 159
            .|:..:...||...         :||.|....        .:|:.| |:.:|:.   :||::.:.
  Rat    71 TEQRETAFPFQPGS---------ITEVCITFDQADLTIKLPDGHEF-KFPNRLN---MEAINYMA 122

  Fly   160 DVSDIVI 166
            ...|..|
  Rat   123 ADGDFKI 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11374NP_608488.3 Gal-bind_lectin 37..162 CDD:278752 30/131 (23%)
Gal-bind_lectin 226..369 CDD:278752
Lgals1NP_063969.1 GLECT 11..135 CDD:214596 32/137 (23%)
Beta-galactoside binding. /evidence=ECO:0000250 45..49 0/3 (0%)
Beta-galactoside binding. /evidence=ECO:0000250 69..72 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344247
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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