DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11374 and lgals3b

DIOPT Version :9

Sequence 1:NP_608488.3 Gene:CG11374 / 33163 FlyBaseID:FBgn0031214 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_999858.2 Gene:lgals3b / 325599 ZFINID:ZDB-GENE-030131-4324 Length:228 Species:Danio rerio


Alignment Length:130 Identity:32/130 - (24%)
Similarity:58/130 - (44%) Gaps:14/130 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LCFVFHGMILMACEHFVIDFLTKQGSEICEECDVLLQIGSRLPQN---YITRNSRLKGKWGPEEN 106
            :....:|.:....:.|.::.  ::|:      |:...|..|..:.   .|.|||.:...||.||.
Zfish   106 MLITINGEVKPNAKQFTVNL--RRGN------DIAFHINPRFSEGGKPVIVRNSMIGNNWGREER 162

  Fly   107 SSYLTFQLNRGKSFWMQILLTEECFFISVNGYHFAKYFHRMPYRWLEAVDVLGDVSDIVIDTYYV 171
             ...:|....||.|.|:||:|:..:.::||..|..::.||:  ..|..:..|...:|:.:.|..|
Zfish   163 -ELPSFPFVPGKPFEMKILITDTEYKVAVNKSHLLEFKHRV--FELNQITGLSIYNDVTLSTVNV 224

  Fly   172  171
            Zfish   225  224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11374NP_608488.3 Gal-bind_lectin 37..162 CDD:278752 29/119 (24%)
Gal-bind_lectin 226..369 CDD:278752
lgals3bNP_999858.2 Gal-bind_lectin 99..223 CDD:214904 31/127 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9258
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D357844at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X133
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.