DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11374 and Lgals2

DIOPT Version :9

Sequence 1:	NP_608488.3	Gene:	CG11374 / 33163	FlyBaseID:	FBgn0031214	Length:	401	Species:	Drosophila melanogaster
Sequence 2:	XP_038934274.1	Gene:	Lgals2 / 171134	RGDID:	621269	Length:	168	Species:	Rattus norvegicus

Alignment Length:	58	Identity:	16/58 - (27%)
Similarity:	29/58 - (50%)	Gaps:	11/58 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   232 LKENFLI------EGSSLRIEGRVRLMPQRFSIAFQKGQEIWPQPTVSFYFSPCFLRS 283
            :.|.|.:      .|.||:|:|::......|:|...:|:|     |::.:|:|.|..|
  Rat     1 MSEKFEVTNLNMKSGMSLKIKGKIHNDVNSFTINLGQGKE-----TLNLHFNPRFNES 53

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11374	NP_608488.3	Gal-bind_lectin	37..162	CDD:278752
CG11374	NP_608488.3	Gal-bind_lectin	226..369	CDD:278752	16/58 (28%)
Lgals2	XP_038934274.1	GLECT	5..168	CDD:214596	15/54 (28%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3587
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11346
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910