DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galectin and Lgals1

DIOPT Version :10

Sequence 1:NP_608487.1 Gene:galectin / 33162 FlyBaseID:FBgn0031213 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_063969.1 Gene:Lgals1 / 56646 RGDID:69355 Length:135 Species:Rattus norvegicus


Alignment Length:119 Identity:33/119 - (27%)
Similarity:51/119 - (42%) Gaps:8/119 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 LSEGISFTVTGNLSVNCERFSINLVYNNDSRDVALHINPRL----PQNYIVRNTKVQDIWGNEEV 206
            |..|....|.|.|:.:.:.|.:||  ..||.::.||.|||.    ..|.||.|:|....||.|:.
  Rat    12 LKPGECLKVRGELAPDAKSFVLNL--GKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGTWGTEQR 74

  Fly   207 SSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYRDVRILEVKGD 260
            .:|.||  ..|....:.:...:|...|.:...|...:.:|:....:..:...||
  Rat    75 ETAFPF--QPGSITEVCITFDQADLTIKLPDGHEFKFPNRLNMEAINYMAADGD 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galectinNP_608487.1 GLECT 143..262 CDD:238025 33/119 (28%)
Gal-bind_lectin 346..479 CDD:459768
Lgals1NP_063969.1 GLECT 11..135 CDD:214596 33/119 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.