DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galectin and lec-12

DIOPT Version :9

Sequence 1:NP_608487.1 Gene:galectin / 33162 FlyBaseID:FBgn0031213 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001023759.2 Gene:lec-12 / 178548 WormBaseID:WBGene00017080 Length:340 Species:Caenorhabditis elegans


Alignment Length:371 Identity:89/371 - (23%)
Similarity:130/371 - (35%) Gaps:105/371 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 IGKLSEGISFTVTG----NLSVNCERFSIN----LVYNNDSRD-VALHINPRLP----------Q 188
            :|.|..|.:..|:|    ..:.:.:||.|:    |:.:.|..| .|||.|||..          .
 Worm    27 VGGLFAGRAIVVSGMVLPGFASDRKRFQIDLCCGLLIDGDHMDNKALHFNPRFDAKTGWFSGPGD 91

  Fly   189 NYIVRNTKVQDIWGNEEVSSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYRDVR 253
            :.:|.|:.|...|||||.... ||  ..||.|.|:::|.|..:.||.:|:|...:.||:|...:|
 Worm    92 DKLVINSFVSGRWGNEERFDN-PF--KEGEPFQIRIMVFEKYFKISASGKHMCDFPHRVPVESIR 153

  Fly   254 ILEVKGDVSNVEMKRTLVLKYPERLPQSEANNIELHIDDGINEIDASVEETVKIPHEWCI--ISA 316
            .:.:.|::                    ..:.:|.|...||. .|.........|.:..|  |..
 Worm   154 TISINGNI--------------------RVDYVEFHPPIGIG-ADGKPTLVAPTPKQEVITKIDK 197

  Fly   317 PNTQSDSSPKRNNSSNDLGLTLPYYGALPPNSLVDGRCLKIEGRVRLLPHSFYINLQ-------- 373
            ||                   :|:...|||...|..:..:......|....|.|||:        
 Worm   198 PN-------------------VPFELPLPPGGFVSPQSARFTITPFLSSERFTINLKSKGEFLFH 243

  Fly   374 -------QGQDIWPHPVIAFHLNPRFSKASSGAIGKAVVCRNAWLNGA-WAQEERSEFDTNFRPG 430
                   |.|.|.||                       |.||:..||. |..|||:.....|..|
 Worm   244 FRVDMPNQAQKIKPH-----------------------VIRNSSKNGVKWLTEERTFGTFPFHKG 285

  Fly   431 RSFCLAIVCTKTSFEVYVNRQFMTDFKYK--VSPEVVDTVYIQGDV 474
            .:..:.......|..|.|:......|.|:  ..|..||.:.:.|||
 Worm   286 ITHDIVFTAYGKSVTVDVDGAPFVKFVYRDGDDPVNVDQITVVGDV 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galectinNP_608487.1 GLECT 143..262 CDD:238025 42/137 (31%)
Gal-bind_lectin 339..479 CDD:278752 37/154 (24%)
lec-12NP_001023759.2 GLECT 21..167 CDD:238025 42/162 (26%)
Gal-bind_lectin 208..337 CDD:214904 34/147 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164628
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D357844at33208
OrthoFinder 1 1.000 - - FOG0000178
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11346
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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