DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galectin and lec-1

DIOPT Version :9

Sequence 1:NP_608487.1 Gene:galectin / 33162 FlyBaseID:FBgn0031213 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001022405.1 Gene:lec-1 / 174964 WormBaseID:WBGene00002264 Length:285 Species:Caenorhabditis elegans


Alignment Length:359 Identity:87/359 - (24%)
Similarity:137/359 - (38%) Gaps:87/359 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 FYEYADAVPKYFNDQIGKLSEGISFTVTGNLSVNCERFSINL---VYNNDSRDVALHINPRLPQN 189
            :||....|| |.:....|...|.:..|.|:.....:||:|||   ..:....||.||::.|..:.
 Worm    10 WYEQNKPVP-YRSVLQEKFEPGQTLIVKGSTIDESQRFTINLHSKTADFSGNDVPLHVSVRFDEG 73

  Fly   190 YIVRNTKVQDIWGNEEVSSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYRDVRI 254
            .||.|:.....||.||..|. |  :.:|:.|.|::...:..:.|.|:.:.|..|.||:|...:..
 Worm    74 KIVLNSFSNGEWGKEERKSN-P--IKKGDSFDIRIRAHDDRFQIIVDHKEFKDYEHRLPLSSISH 135

  Fly   255 LEVKGDVSNVEMKRTLVLKYPERLPQSEANNIELHIDDGINEIDASVEETVKIPHEWCIISAPNT 319
            |.:.||:.                               :|.:            .|.....|  
 Worm   136 LSIDGDLY-------------------------------LNHV------------HWGGKYYP-- 155

  Fly   320 QSDSSPKRNNSSNDLGLTLPYYGALPPNSLVDGRCLKIEGRVRLLPHSFYIN-LQQGQDIWPHPV 383
                              :||...| .|.|..|:.|.:.|.|......|::| |::..|      
 Worm   156 ------------------VPYESGL-ANGLPVGKSLLVFGTVEKKAKRFHVNLLRKNGD------ 195

  Fly   384 IAFHLNPRFSKASSGAIGKAVVCRNAWLNGAWAQEERSEFDTNFRPGRSFCLAIVCTKTSFEVYV 448
            |:||.||||.:..        |.||:.....|..||| |....|..|..|.|.|...:.:|:|:|
 Worm   196 ISFHFNPRFDEKH--------VIRNSLAANEWGNEER-EGKNPFEKGVGFDLVIQNEEYAFQVFV 251

  Fly   449 NRQFMTDFKYKVSPEVVDTVYIQGDVKLWNVTLE 482
            |.:....|.::..|..:..:.|.||::|..:.::
 Worm   252 NGERYISFAHRADPHDIAGLQISGDIELSGIQIQ 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galectinNP_608487.1 GLECT 143..262 CDD:238025 36/121 (30%)
Gal-bind_lectin 339..479 CDD:278752 43/140 (31%)
lec-1NP_001022405.1 GLECT 18..148 CDD:238025 39/176 (22%)
GLECT 157..283 CDD:238025 43/141 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I5463
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.919607 Normalized mean entropy S5429
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D357844at33208
OrthoFinder 1 1.000 - - FOG0000178
OrthoInspector 1 1.000 - - mtm4724
orthoMCL 1 0.900 - - OOG6_106881
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3565
SonicParanoid 1 1.000 - - X133
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.800

Return to query results.
Submit another query.