DRSC/TRiP Functional Genomics Resources

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Protein Alignment galectin and Lgals2

DIOPT Version :9

Sequence 1:NP_608487.1 Gene:galectin / 33162 FlyBaseID:FBgn0031213 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_038934274.1 Gene:Lgals2 / 171134 RGDID:621269 Length:168 Species:Rattus norvegicus


Alignment Length:119 Identity:37/119 - (31%)
Similarity:57/119 - (47%) Gaps:37/119 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 SLVDGRCLKIEGRVRLLPHSFYINLQQGQDIWPHPVIAFHLNPRFSKASSGAIGKAVVCRNAWLN 412
            ::..|..|||:|::....:||.|||.||::     .:..|.||||::::       :||..  |:
  Rat    11 NMKSGMSLKIKGKIHNDVNSFTINLGQGKE-----TLNLHFNPRFNEST-------IVCNT--LD 61

  Fly   413 G-AWAQEERSEFDTNFRPGRSFCLAIVCTKTSFEVYVNRQFMTDFKYKVSPEVV 465
            | :|.||:| |..:.|.||.             ||.|        :.|.||:||
  Rat    62 GSSWGQEQR-ENHSCFSPGS-------------EVKV--------RSKGSPKVV 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galectinNP_608487.1 GLECT 143..262 CDD:238025
Gal-bind_lectin 339..479 CDD:278752 37/119 (31%)
Lgals2XP_038934274.1 GLECT 5..168 CDD:214596 37/119 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11346
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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