DRSC/TRiP Functional Genomics Resources

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Protein Alignment galectin and lgals12

DIOPT Version :9

Sequence 1:NP_608487.1 Gene:galectin / 33162 FlyBaseID:FBgn0031213 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_002937539.2 Gene:lgals12 / 100487358 XenbaseID:XB-GENE-6462760 Length:312 Species:Xenopus tropicalis


Alignment Length:348 Identity:89/348 - (25%)
Similarity:131/348 - (37%) Gaps:78/348 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 GKLSEGISFTVTGNLSVNCERFSINLVYNNDSR---DVALHINPRL--PQNYIVRNTKVQDIWGN 203
            |.|..|....|.|.:|....||||:|.....:|   |||.|.|||.  .:..:|.||..::.|.:
 Frog    27 GGLRPGKMILVQGRVSGTANRFSIDLQVGCSTRPRADVAFHFNPRFSSSETLVVCNTLTREQWLH 91

  Fly   204 EEVSSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYRDVRILEVKGDVSNVEMKR 268
            |:  ..|...|.:|:.|.:..|:.|....:|:.|||...|.:|:|..||..|.:.||||      
 Frog    92 ED--HHLCPQLRKGQPFLLLFLILEDKIKVSIEGQHLLDYPNRLPLCDVDTLGICGDVS------ 148

  Fly   269 TLVLKYPERLPQSEANNIELHIDDGINEIDASVEETVKIPHEWCIISAPNTQSDSSP-KRNNSSN 332
            ...:.:..|.|.|          ||..|            :..|           .| |..|.:.
 Frog   149 VQGISFLCRNPFS----------DGDTE------------YPLC-----------QPLKLGNVAM 180

  Fly   333 DLGLTLPYYGALPPNSLVDGRCLKIEGRVRLLPHSFYINLQQGQDIWPHPVIAFHLNPRFSKASS 397
            ...|:.|.     ||.:.||....:.|.....|....|.|:.|.      .|.|.|...|...: 
 Frog   181 ATPLSKPL-----PNGISDGHMTTVRGLASASPDEIIILLKSGD------FIPFKLTASFKDQT- 233

  Fly   398 GAIGKAVVCRNAWLNGAWA--QEERSEFDTNFRPGRSFCLAIVCTKTSFEVYVNRQFMTDFKYKV 460
                   :..|..:...||  ||.::.|.. |...|.|.:.|......|::.:|...:..|    
 Frog   234 -------LLYNYLMGPLWAKPQEIQTPFFL-FHAERFFEIRIFSETRGFKLAINGVPLDVF---- 286

  Fly   461 SP-----EVVDTVYIQGDVKLWN 478
            ||     :.:|.:.|.|.||:::
 Frog   287 SPPALDLKSIDEIQINGSVKVYS 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galectinNP_608487.1 GLECT 143..262 CDD:238025 42/122 (34%)
Gal-bind_lectin 339..479 CDD:278752 34/147 (23%)
lgals12XP_002937539.2 Gal-bind_lectin 27..153 CDD:214904 44/133 (33%)
Gal-bind_lectin 189..310 CDD:214904 33/140 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D357844at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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