DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda5 and ctbs

DIOPT Version :10

Sequence 1:NP_722590.2 Gene:Cda5 / 33158 FlyBaseID:FBgn0051973 Length:1998 Species:Drosophila melanogaster
Sequence 2:NP_001018565.1 Gene:ctbs / 553763 ZFINID:ZDB-GENE-050522-422 Length:361 Species:Danio rerio


Alignment Length:190 Identity:41/190 - (21%)
Similarity:59/190 - (31%) Gaps:71/190 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  1780 MYKMLYD------------SNFTYDSSMPVYE-----NRPPS-------WPYTLDYKIFHDCMIP 1820
            ::.|.||            :|..||.::..|:     |..|.       | |..||.        
Zfish   184 LFVMSYDEQSQIWGDCIAMANAPYDQTLTAYDQYISMNIDPKKLVMGVPW-YGYDYS-------- 239

  Fly  1821 PCPTRSYPGVWQVPMVMWQDLNGGRCSMGDACSNPSDADGVTKMIMKNFERHYT------TNRAP 1879
             |...|..||..:|.|.::         |..||:.|.......::||......:      ..|||
Zfish   240 -CLNFSKDGVCTIPKVPFR---------GAPCSDASGRQIPYSIMMKQINSSISGRLWDEEQRAP 294

  Fly  1880 F-------GLFYHAAWFTQPHHKEGFIKFLDAINAMQ------DVWIITNWQALQWVRDP 1926
            :       |: .|..|:..|....     |.|...||      .:|   |...|.:..||
Zfish   295 YYNYKDTEGM-VHQVWYDDPESIA-----LKAAYVMQHGLKGIGMW---NGNLLDYNGDP 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda5NP_722590.2 CBM_14 58..106 CDD:426342
CE4_CDA_like_2 1664..1926 CDD:200597 39/188 (21%)
ctbsNP_001018565.1 GH18_chitobiase 5..358 CDD:119354 41/190 (22%)
Blue background indicates that the domain is not in the aligned region.

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