DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda5 and serp

DIOPT Version :10

Sequence 1:NP_722590.2 Gene:Cda5 / 33158 FlyBaseID:FBgn0051973 Length:1998 Species:Drosophila melanogaster
Sequence 2:NP_730444.1 Gene:serp / 40150 FlyBaseID:FBgn0260653 Length:541 Species:Drosophila melanogaster


Alignment Length:369 Identity:143/369 - (38%)
Similarity:216/369 - (58%) Gaps:29/369 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1634 AAKCRKDVCLLPDCYCG--GRDIPGELPVESIPQIVLLTFDDSVNDLNKQLYTDLFEKGRVNPNG 1696
            |..|...||:||||:|.  |..|||:||.:.:|.::.:||||::|:.|.:||.::| |.|.||||
  Fly   168 APPCDPAVCVLPDCFCSEDGTSIPGDLPAKDVPMMITITFDDAINNNNIELYKEIF-KDRKNPNG 231

  Fly  1697 CPITATFYVSHEWTDYSQVQNLYADGHEMASHTVSHSFGEQF----SQKKWTREIAGQREILAAY 1757
            |.|.||::|||::|:||.||.....|||:|.|:::|:..|:|    :...|.:|:||.|.|...:
  Fly   232 CSIKATYFVSHKYTNYSAVQETARKGHEIAVHSITHNDEERFWSNATVDDWAKEMAGMRIITEKF 296

  Fly  1758 GGVKMSDVRGMRAPFLSVGGNKMYKMLYDSNFTYDSSMPVYENRPPSWPYTLDYKIFHDC--MIP 1820
            ..:..:.|.|:|||:|.||||..:.|:.:..|.|||::....:.||.||||:.:::.|.|  .:.
  Fly   297 ANITDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQ 361

  Fly  1821 PCPTRSYPGVWQVPM---------VMWQDLNGGRCSMGDACSNPSDADGVTKMIMKNFERHYTTN 1876
            .|||||: .||::.|         |..:.|.|  |:|.|:|||....|.....:..||:|||..|
  Fly   362 SCPTRSH-AVWEMVMNELDRREDPVNDEYLPG--CAMVDSCSNILTGDQFYNFLNHNFDRHYDQN 423

  Fly  1877 RAPFGLFYHAAWF-TQPHHKEGFIKFLDAINA-MQDVWIITNWQALQWVRDPTPISRINSFQPF- 1938
            |||.||::||||. ..|...:.|:.::|.|.| ..||:.:|..|.:||:::|..||.:.:|:|: 
  Fly   424 RAPLGLYFHAAWLKNNPEFLDAFLYWIDEILANHNDVYFVTMTQVIQWMQNPRTISEVKNFEPWR 488

  Fly  1939 -QCDYSDRPKRCNNPKVCNLWHK---SGVRYMKTCQPCPDIYPW 1978
             :|....:| .|..|..|.|..|   .....::||..||:.|||
  Fly   489 EKCVVEGKP-ACWVPNTCKLTSKEVPGETINLQTCVRCPNNYPW 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda5NP_722590.2 CBM_14 58..106 CDD:426342
CE4_CDA_like_2 1664..1926 CDD:200597 109/278 (39%)
serpNP_730444.1 CBM_14 48..105 CDD:426342
LDLa 125..159 CDD:238060
CE4_CDA_like_1 200..475 CDD:200596 109/278 (39%)
Blue background indicates that the domain is not in the aligned region.

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