DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda5 and Idgf3

DIOPT Version :10

Sequence 1:NP_722590.2 Gene:Cda5 / 33158 FlyBaseID:FBgn0051973 Length:1998 Species:Drosophila melanogaster
Sequence 2:NP_477256.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster


Alignment Length:474 Identity:92/474 - (19%)
Similarity:145/474 - (30%) Gaps:164/474 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1266 DSYQNGINEKETAIDYSSTEHVVAITER-PTVKFLYSNKYRQQTAEHTLADSLQNSGYITSPNGS 1329
            |:|:.....|...::......:.::.|| |.:|||.|        ....||:.:.:.||      
  Fly    69 DNYEMQSINKRLDLEQRHLAQITSMKERYPHIKFLLS--------VGGDADTYEGNQYI------ 119

  Fly  1330 SQKFRSANVLDQLRQFLSGSDSNSKSDESANSQFVNEYSLPELRSAIGEIKKLYLPNDRP----- 1389
                   .:|:      ||...:.:..|||. ..|..|:...|..|      |.||.::|     
  Fly   120 -------KLLE------SGQQGHRRFIESAR-DLVRRYNFDGLDLA------LQLPRNKPRKVHG 164

  Fly  1390 ---------------------ATTTLKSSTTTLHPDTTPIATLFPIRIKGVSVLPSLNIL-TANS 1432
                                 .:.|.|...|.|..|.:       ..:|...:|.||.:| ..||
  Fly   165 DVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKDLS-------AALKQNDLLLSLTVLPNVNS 222

  Fly  1433 TLTERTTSSTP----------DFSTPRTLKTPPVSLTTVPTIPTGTATPSSFAPHTARASRVNND 1487
            :......|..|          ||.||:  :.|..:..:.||.                       
  Fly   223 SWYYDAPSIAPSLDFINLGTFDFLTPQ--RNPEEADFSAPTY----------------------- 262

  Fly  1488 IKSSIAAAALGPSTSTYQPP---VSAGKTQKFQIGFATNNKNHQLQKSS--------INHNGPAA 1541
              .::....||.....:|..   :......|..||.||..::.::.|.|        .:..|||.
  Fly   263 --EAVGQNRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDSGMPVVPSTQGPAP 325

  Fly  1542 SASVKCSDSTLNAKCNEISSRNNNRNRGSAMYSNQDRDVISTPNRGTHPPRTR---PTLKPSGTI 1603
            :......:..||  ..||.|...|.:..:|              ||.:.|..|   || |..|:.
  Fly   326 AGPQSKQEGLLN--WAEICSLMPNPSNSNA--------------RGPNAPVKRVVDPT-KRYGSY 373

  Fly  1604 VSKAQEFVDIYRYPPSRPDPIYPQPMPDKTAAKCRKDVCLLPDCYCGGRDIPGELPVESIPQIVL 1668
            ..:|.:....:....|..|       ||..::|.         .|...|::.|           :
  Fly   374 AFRAADENGDHGLWISYDD-------PDSASSKA---------MYARARNLGG-----------V 411

  Fly  1669 LTFDDSVNDLNKQLYTDLF 1687
            ..||.:.:|...|...|.|
  Fly   412 ALFDLTQDDFRGQCTNDRF 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda5NP_722590.2 CBM_14 58..106 CDD:426342
CE4_CDA_like_2 1664..1926 CDD:200597 6/24 (25%)
Idgf3NP_477256.1 GH18_IDGF 26..440 CDD:119352 92/474 (19%)
Blue background indicates that the domain is not in the aligned region.

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