DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda5 and Cda4

DIOPT Version :10

Sequence 1:NP_722590.2 Gene:Cda5 / 33158 FlyBaseID:FBgn0051973 Length:1998 Species:Drosophila melanogaster
Sequence 2:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster


Alignment Length:402 Identity:161/402 - (40%)
Similarity:228/402 - (56%) Gaps:17/402 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1599 PSGTIVSKAQEFVDIYRYPPSRPDPIYPQP---MPDKTAAKCRKDVCLLPDCYCG--GRDIPGEL 1658
            |||......|:|..........|.|..|.|   .|..||.:|..:.|.||.|:|.  |..|||:|
  Fly    60 PSGLFFDDVQKFCTFKDEAKCGPLPTTPAPATEAPADTAQRCNTENCALPYCFCSKDGTQIPGDL 124

  Fly  1659 PVESIPQIVLLTFDDSVNDLNKQLYTDLFEKGRVNPNGCPITATFYVSHEWTDYSQVQNLYADGH 1723
            ..|.||||::||||.:||..|.|.|..:|:..|.|||||.|..||::|||:::|.|:|:|...||
  Fly   125 EPEKIPQIIMLTFDGAVNLNNYQHYQKIFDGKRKNPNGCLIRGTFFMSHEYSNYQQIQHLGYYGH 189

  Fly  1724 EMASHTVSHSFG-EQFSQKKWTREIAGQREILAAYGGVKMSDVRGMRAPFLSVGGNKMYKMLYDS 1787
            |:.:.::|...| :....::|..|:.|.||||..:..|.::||.|||||||..|.|..||:|.|.
  Fly   190 EIGTESISQQQGLQDKGYEEWVGEMIGMREILRHFANVSVNDVVGMRAPFLKPGRNTQYKVLEDF 254

  Fly  1788 NFTYDSSMPVYENRPPSWPYTLDYKIFHDCMIPPCPTRSYPGVWQVPMVMW--QDLNGGRCSMGD 1850
            .:.||||:.|.....|.|||||||||.|:|....||:|::||||:||:...  :...||.|...|
  Fly   255 GYIYDSSITVPPVPVPVWPYTLDYKISHECKSGTCPSRTFPGVWEVPLNTHYVEGYEGGHCPYLD 319

  Fly  1851 AC-SNPSDADGVTKMIMKNFERHYTTNRAPFGLFYHAAWFTQPHHKEGFIKFLDAINAMQDVWII 1914
            .| .:..|.:.|.:.:.::|.|:|..|:||:.:.:|..||.....:.|..||||....:.||:|:
  Fly   320 QCVLHNLDEEEVFQWLQEDFSRYYEQNKAPYMMPFHTNWFQTKPLENGLHKFLDWALELPDVYIL 384

  Fly  1915 TNWQALQWVRDPTPISRINSFQPFQCD--YSDRPKRCNNPKVCNLWHK------SGVRYMKTCQP 1971
            |..|.||:|.||..:..::..:.::||  .|..||.||..:.|.|..|      :..|||:||:.
  Fly   385 TVTQMLQYVTDPKELRDVSQIESWKCDKSVSVAPKPCNIWQTCALPFKIPEQNLTDTRYMETCRE 449

  Fly  1972 CPDIYPWTGKSG 1983
            ||::|||.|.:|
  Fly   450 CPNVYPWLGDAG 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda5NP_722590.2 CBM_14 58..106 CDD:426342
CE4_CDA_like_2 1664..1926 CDD:200597 112/265 (42%)
Cda4NP_728468.1 CBM_14 33..80 CDD:426342 5/19 (26%)
CE4_CDA_like_1 130..396 CDD:200596 112/265 (42%)
Blue background indicates that the domain is not in the aligned region.

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