DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and GLR2.1

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_198062.2 Gene:GLR2.1 / 832768 AraportID:AT5G27100 Length:901 Species:Arabidopsis thaliana


Alignment Length:626 Identity:118/626 - (18%)
Similarity:221/626 - (35%) Gaps:123/626 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ELLASKFHVNS---------YNFEQTNSLVGLVNKIAQEYLNKCPPVIYYDSFVEKSDGLILENL 133
            |||||:|...:         |.:..||::..:::.:.:..:.....|:...::|.:|..  |||.
plant   231 ELLASRFFAKATEIGLMKQGYVWILTNTITDVLSIMNETEIETMQGVLGVKTYVPRSKE--LENF 293

  Fly   134 ----FKTIPITFYHGEIN---------------ADYEAKNKRFTSHIDCNCKSYILFLSDPLMTR 179
                .|..||:    ::|               |..||.....| .:..:.|..:..|....:::
plant   294 RSRWTKRFPIS----DLNVYGLWAYDATTALALAIEEAGTSNLT-FVKMDAKRNVSELQGLGVSQ 353

  Fly   180 KILGP---QTESRVVLVSRSTQWRLRDFLSSELSSN---IVNLLVIGESLMADPMRE-------- 230
              .||   ||.|||.....:..::   |::.||..:   |||:...|...:...|:|        
plant   354 --YGPKLLQTLSRVRFQGLAGDFQ---FINGELQPSVFEIVNVNGQGGRTIGFWMKEYGLFKNVD 413

  Fly   231 -RPYVLYTHKLYADGLGSNTPVVLTSWIKGALSRPHINLFPSKFQFGFAGHRFQISAANQPPFIF 294
             :|....|...:.|.|   .|::   |.....|      .|..::....|.|.||.......|..
plant   414 QKPASKTTFSSWQDRL---RPII---WPGDTTS------VPKGWEIPTNGKRLQIGVPVNNTFQQ 466

  Fly   295 RIRTLDSSGMGQLRWDGVEFRLLTMISKRLNFSIDITETPTRSNTRGVVDTIQEQIIERTVDIGM 359
            .::...........:.|........:.:.:.:.|.....|.:.   |..|.:..|:.....|..:
plant   467 FVKATRDPITNSTIFSGFSIDYFEAVIQAIPYDISYDFIPFQD---GGYDALVYQVYLGKYDAVV 528

  Fly   360 SGIYITQERLMDSAMSVGHSPDCAAFITLASKALPKYRAI-MGPFQWPVW-VALICVYLGGIFPI 422
            :...|:..|.|....|:.::|.....:.....::.:...| :.|....:| ::|:..::.|:...
plant   529 ADTTISSNRSMYVDFSLPYTPSGVGLVVPVKDSVRRSSTIFLMPLTLALWLISLLSFFIIGLVVW 593

  Fly   423 VFTDRLTLSHLMGNWGEVENMFWYVFGMFTNA-----FSFTGKYSWSNTRKNSTRLLIGAYWLFT 482
            |...|:..........::..:||:.|.:...|     .||     |:       |:::..::...
plant   594 VLEHRVNPDFDGPGQYQLSTIFWFSFSIMVFAPRERVLSF-----WA-------RVVVIIWYFLV 646

  Fly   483 IIITSCYTGSIIAFVTLPAFPDTVDSVLDLLG--------LFFRVGTLNNGGWETWFQNSTHIP- 538
            :::|..||.|:.:.:|......||.::..||.        ..|.:|.|.:.|:......|...| 
plant   647 LVLTQSYTASLASLLTTQHLHPTVTNINSLLAKGESVGYQSSFILGRLRDSGFSEASLVSYGSPE 711

  Fly   539 -TSRLYKKMEFVGSVDEGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSALHLSEECF 602
             ...|..|    |..:.|:..|.....:...|||.......:||:.|..:.              
plant   712 HCDALLSK----GQAEGGVSAVLMEVPYVRIFLGQYCNKYKMVQTPFKVDG-------------- 758

  Fly   603 ALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSW 643
                :||:||..|.....|...||..::|....::.|  :|
plant   759 ----LGFVFPIGSPLVADISRAILKVEESNKANQLEN--AW 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 53/310 (17%)
Lig_chan 407..662 CDD:278489 50/253 (20%)
GLR2.1NP_198062.2 PBP1_GABAb_receptor 49..411 CDD:107361 41/191 (21%)
ANF_receptor 49..392 CDD:279440 38/172 (22%)
GluR_Plant 452..794 CDD:270404 68/381 (18%)
Periplasmic_Binding_Protein_Type_2 478..>685 CDD:304360 36/221 (16%)
Lig_chan 576..835 CDD:278489 50/254 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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