DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and GLR1.1

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_187061.1 Gene:GLR1.1 / 819566 AraportID:AT3G04110 Length:808 Species:Arabidopsis thaliana


Alignment Length:749 Identity:142/749 - (18%)
Similarity:269/749 - (35%) Gaps:202/749 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WVALVLFTAQAFSIEG---DRSASYQEKCISRRLINHY--QLNK------EIFGVGMCDGNNENE 58
            |...:....:.|..:|   .||||:   .:|....||.  ||.|      .:|.|.|        
plant   174 WSESLQILVENFQDKGIYIARSASF---AVSSSGENHMMNQLRKLKVSRASVFVVHM-------- 227

  Fly    59 FRQKRRIVPTFQGNPRPRGELLASKFHVNSYNFEQTNSLVGLVNKIAQEYLNKCPPVIYYDSF-- 121
                              .|:|.|:.      |:....| ||:.: |..::.....:.|.:.|  
plant   228 ------------------SEILVSRL------FQCVEKL-GLMEE-AFAWILTARTMNYLEHFAI 266

  Fly   122 VEKSDGLILENLFKT-IPITFYHGEINADYEAKNKRFTSHIDCNCKSYILFLSDPLMTRKILGPQ 185
            .....|:|   .||: ||::         .|.||  |||.:                 ||.:|..
plant   267 TRSMQGVI---GFKSYIPVS---------EEVKN--FTSRL-----------------RKRMGDD 300

  Fly   186 TE---SRVVLVSR---------------STQWRLRDFLSSELSSNIVNLL-------VIGESLMA 225
            ||   |.|::..|               |...::.  .||.:|:::::.:       :.|:..::
plant   301 TETEHSSVIIGLRAHDIACILANAVEKFSVSGKVE--ASSNVSADLLDTIRHSRFKGLSGDIQIS 363

  Fly   226 DPMRERPYVLYTHKLYADGLGSNTPVVLTSWIKGALSRPHINLFPSKFQ-------FGFAGH--- 280
            |    ..::..|.::...|......:.|  |..|:.|:....::|.:.:       ....|.   
plant   364 D----NKFISETFEIVNIGREKQRRIGL--WSGGSFSQRRQIVWPGRSRKIPRHRVLAEKGEKKV 422

  Fly   281 -RFQISAANQPPFIFRIRTLDSSGMGQLRWDGVE-FRLLTMISKRLNFSIDITETPTRSNTRGVV 343
             |..::|.|:.|.:..:|....:|:..:....|| |:  |.|:.   |:.::...|.|.|...:.
plant   423 LRVLVTAGNKVPHLVSVRPDPETGVNTVSGFCVEVFK--TCIAP---FNYELEFIPYRGNNDNLA 482

  Fly   344 DTIQEQIIERTVDIGMSGIYITQERLMDSAMSVGHSPDCAAFITLASKALPKYRAIMGPFQWPVW 408
            ..:..|  ....|..:..|.||..|.:....::.::......:|:..|:...: ....||:..:|
plant   483 YLLSTQ--RDKYDAAVGDITITSNRSLYVDFTLPYTDIGIGILTVKKKSQGMW-TFFDPFEKSLW 544

  Fly   409 VALICVY-LGGIFPIVFTDRLTLSHLMGNWG-EVENMFWYVFGMFTNAFSFTGKYSWSNTRKNST 471
            :|....: |.||. :...:|.......|:|| ::..|.|  ||..|..|:...|     .:|.|:
plant   545 LASGAFFVLTGIV-VWLVERSVNPEFQGSWGQQLSMMLW--FGFSTIVFAHREK-----LQKMSS 601

  Fly   472 RLLIGAYWLFTI-IITSCYTGSIIAFVTLPAFPDTVDSVLDLLGLFFRVGTLNNGGWETWFQNST 535
            |.|: ..|:|.: |:||.|:.::.:..|:...                  .||:   :..|..||
plant   602 RFLV-IVWVFVVLILTSSYSANLTSTKTISRM------------------QLNH---QMVFGGST 644

  Fly   536 HIPTSRLYKKMEFVGSVDEGIGNVTQSFFWNYAFLGSKAQLEYLVQ---------SNFSDENISR 591
            ...|::|       ||:     |..::    ||.|.....|.:::.         .|:.::.:  
plant   645 TSMTAKL-------GSI-----NAVEA----YAQLLRDGTLNHVINEIPYLSILIGNYPNDFV-- 691

  Fly   592 RSALHLSEECFALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVMQRSSSGRLLQA 656
                 :::........||:|.:.|....|:...|...:..|::..:  |..|..:..|.......
plant   692 -----MTDRVTNTNGFGFMFQKGSDLVPKVSREIAKLRSLGMLKDM--EKKWFQKLDSLNVHSNT 749

  Fly   657 SSSNSLREIIQEERQLTTADTEGMFLLMALGYFL 690
            ....|..:..:..::.|..:..|:|::....:.|
plant   750 EEVASTNDDDEASKRFTFRELRGLFIIAGAAHVL 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 63/306 (21%)
Lig_chan 407..662 CDD:278489 52/266 (20%)
GLR1.1NP_187061.1 PBP1_GABAb_receptor 31..397 CDD:107361 58/298 (19%)
ANF_receptor 45..377 CDD:279440 53/276 (19%)
Periplasmic_Binding_Protein_Type_2 421..737 CDD:304360 75/378 (20%)
Lig_chan 542..781 CDD:278489 56/293 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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