DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and GLR2.7

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_180476.3 Gene:GLR2.7 / 817460 AraportID:AT2G29120 Length:952 Species:Arabidopsis thaliana


Alignment Length:443 Identity:91/443 - (20%)
Similarity:150/443 - (33%) Gaps:112/443 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 PFQWPVWVALIC--VYLGGIFPI----VFTD-RLTLSHLMGNWGEVENMFWYVFGMFTNAFSFTG 459
            |:...:||...|  |::|.|..|    |.|| |....|.:|      ..||:.|.  |..|:...
plant   580 PWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIG------TSFWFAFS--TMNFAHRE 636

  Fly   460 KYSWSNTRKNSTRLLIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLLGLFFRVGTLNN 524
            |     ...|..|.::..:....:::...||.::.:|.|:.....||.:..||:.....:|    
plant   637 K-----VVSNLARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKDLIKFNKNIG---- 692

  Fly   525 GGWETWFQNSTHIPTSRLYKKMEFVGSVDEGIGNVTQ--SFFWNYAFLGSKAQLEYLVQSNFSDE 587
                  :|..|.:  ..|.|...|..|..:..|:..:  ..|.|.....|..::.|:  .....:
plant   693 ------YQRGTFV--RELLKSQGFDESQLKPFGSAVECDELFSNGTITASFDEVAYI--KVILSQ 747

  Fly   588 NISRRSALHLSEECFALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVMQRSSSGR 652
            |.|:.:   :.|..|.....||:||::|.....:...||...|...:..|.|:  |..:.::...
plant   748 NSSKYT---MVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIENK--WFKKPNNCPD 807

  Fly   653 LLQASSSNSLREIIQEERQLTTADTEGMFLLMALGYFLGATALVSEIV----------------G 701
            |..:.|||          .|:.:...|:||:..:..||.....|:..:                |
plant   808 LNTSLSSN----------HLSLSSFWGLFLIAGIASFLALLIFVANFLYEHKHTLFDDSENSFRG 862

  Fly   702 GITNKCRQIIKRSRKS---------AASSWSSASSGSMLRTNAEQLSHDKRKANRREAAEVAQKM 757
            .:....|...::..||         ..||..:..|.|.|...:..|.....:             
plant   863 KLKFLVRNFDEKDIKSHMFKENAVHNVSSPITQGSSSPLTDQSTPLPRSPEQ------------- 914

  Fly   758 SFGMRELNLTRATLREIYGSYGAPETDHGQLDIVHTEFPNSSAKLNNIEDEES 810
               .|||.|.|.:           ....|:|....:|         .:|||||
plant   915 ---YRELELRRVS-----------SISSGELFTTQSE---------QVEDEES 944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 42/189 (22%)
Lig_chan 407..662 CDD:278489 60/263 (23%)
GLR2.7NP_180476.3 PBP1_GABAb_receptor 40..421 CDD:107361
ANF_receptor 54..405 CDD:279440
GluR_Plant 460..799 CDD:270404 56/250 (22%)
Lig_chan 584..832 CDD:278489 64/289 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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