DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and GLR2.9

DIOPT Version :10

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001325277.1 Gene:GLR2.9 / 817458 AraportID:AT2G29100 Length:942 Species:Arabidopsis thaliana


Alignment Length:767 Identity:142/767 - (18%)
Similarity:244/767 - (31%) Gaps:263/767 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YYWVALVLFTAQAFSIEGDRSASYQEKCISRRLINHYQLNKEIFGVGMCDGNNENEFRQKRRIVP 67
            |.|:.....|.....|...||.:..|..:..|  :|...:||:         .:...|.||    
plant   248 YVWLMTNGMTHMMRHINNGRSLNTIEGVLGVR--SHVPKSKEL---------GDFRLRWKR---- 297

  Fly    68 TFQ-GNPRPRGELLASKFHVNSYNFEQTNSLVGLVNKIAQEYLNKCPPVIYYD--SFVEKSD--- 126
            ||: .||..|.:|       |.:.....:|:..|...:.:.....    ::||  |.:.|:.   
plant   298 TFEKENPSMRDDL-------NVFALWAYDSITALAKAVEKANTKS----LWYDNGSTLSKNRTDL 351

  Fly   127 --------GLILENLFKTIPITFYHGEIN-ADYEAKNKRFTSHIDCNCKSYILFLSDPLMTRKIL 182
                    |..|:..|..:......||.. .|.:.::.:|         ..|.|:.:        
plant   352 GNVGVSLYGPSLQKAFSEVRFNGLAGEFKLIDGQLQSPKF---------EIINFVGN-------- 399

  Fly   183 GPQTESRVVLVSRSTQWRLRDFLSSELSSNIVNLLVIGESLMADPMRERPYVLYTHKLYADGLGS 247
                |.|::     ..|..||.|....|||...|         .|      |::..|        
plant   400 ----EERII-----GFWTPRDGLMDATSSNKKTL---------GP------VIWPGK-------- 432

  Fly   248 NTPVVLTSW-IKGALSRPHINLFPSKFQF---------------GFAGHRFQISAANQPPFIFRI 296
             :.:|...| |.|...|..:.:....|.|               |:|...|: :|..:.|::   
plant   433 -SKIVPKGWEIPGKKLRVGVPMKKGFFDFVKVTINPITNKKTPTGYAIEIFE-AALKELPYL--- 492

  Fly   297 RTLDSSGMGQLRWDGVEFRLLTMISKRLNFSIDITETPTRSNTRGVVDTIQEQIIERTVDIGMSG 361
                                  :|.:.::|     |:|...|      .:..|:.::|.|..:..
plant   493 ----------------------VIPEYVSF-----ESPNNYN------NLVYQVYDKTWDAVVGD 524

  Fly   362 IYITQERLM---------DSAMSV------GHSPDCAAFITLASKALPKYRAIMGPFQWPVWVAL 411
            |.||..|.:         :|.:|:      ..:.|...|:.              |:...:||..
plant   525 ITITANRSLYADFTLPFTESGVSMMVPVRDNENKDTWVFLE--------------PWSLELWVTT 575

  Fly   412 IC--VYLGGIFPI-VFTDRLTLSHLMGNWGEVENMFWYVFGMFTNAFSFTGKYSWSNTRKNSTRL 473
            .|  |::|  |.: :|..|:..........::....|:.|.  |..|:..     .|...|..|.
plant   576 GCFFVFIG--FVVWLFEHRVNTDFRGPPQYQIGTSLWFSFS--TMVFAHR-----ENVVSNLARF 631

  Fly   474 LIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLLGLFFRVGTLNNGGWETWFQNSTHIP 538
            ::..:....:::|..||.|:.:|:|:.:...||.:|.||:.....||                  
plant   632 VVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVNDLIKNRDCVG------------------ 678

  Fly   539 TSRLYKKMEFVGSVDEGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSA--------- 594
                |:...||..:..|:|             ..:.||:....:..:|:.:|:..:         
plant   679 ----YQGGAFVKDILLGLG-------------FHEDQLKPFDSAKDADDLLSKGKSKGIAAAFDE 726

  Fly   595 -----LHLSEEC---------FALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVM 645
                 ..||:.|         |.....||.||:.|....:....||...|:.:..:|  |..|..
plant   727 VAYLKAILSQSCSKYVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQI--EDRWFP 789

  Fly   646 QRSSSGRLLQASSSNSLREIIQEERQLTTADTEGMFLLMALGYFLGATALVS 697
            :::.....:.|.|||.|.                  |...||.||.|...:|
plant   790 KKNDCPDPMTALSSNRLN------------------LSSFLGLFLIAGTAIS 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 HisJ 287..>392 CDD:440596 17/119 (14%)
Lig_chan 405..662 CDD:459656 56/282 (20%)
GLR2.9NP_001325277.1 PBP1_GABAb_receptor_plant 33..415 CDD:380645 42/218 (19%)
GluR_Plant 445..788 CDD:270404 76/439 (17%)
Lig_chan 568..821 CDD:459656 63/316 (20%)

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