DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and GLR2.3

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001325281.1 Gene:GLR2.3 / 817007 AraportID:AT2G24710 Length:919 Species:Arabidopsis thaliana


Alignment Length:664 Identity:120/664 - (18%)
Similarity:220/664 - (33%) Gaps:181/664 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LASKFHVNS---------YNFEQTNSLV---GLVNKIAQEYLNKCPPVIYYDSFVEKSDGL---- 128
            |||:|.:.:         |.:..||.::   .|:|:.|.|.:.   .|:...:::.||..|    
plant   256 LASRFFIKAKELGLMEPGYVWILTNGVIDDLSLINETAVEAME---GVLGIKTYIPKSPDLEKFR 317

  Fly   129 -ILENLFKTIPITFY----HGEINA------DYEAKNKRFTSHIDCN---CKSYILFLSDPLMTR 179
             ...:||..:.::.|    :....|      :....|..|:..:|..   .:...|.||.     
plant   318 SRWRSLFPRVELSVYGLWAYDATTALAVAIEEAGTNNMTFSKVVDTGRNVSELEALGLSQ----- 377

  Fly   180 KILGPQTESRVVLVS-RSTQWRLRDFLSSELSSN---IVNLLVIGESLMADPMRERPYVLYTHKL 240
              .||:....::.|. |......| |...:|..:   |||::..||..:.              .
plant   378 --FGPKLLQTLLTVQFRGLAGEFR-FFRGQLQPSVFEIVNIINTGEKSIG--------------F 425

  Fly   241 YADGLG--------SNTPVVLTSW---IKGALSRPHINLFPSKFQFGFAGHRFQISAANQPPFIF 294
            :.:|.|        :::...|::|   :|..:.....:..|..:|....|.:.:|....:..:..
plant   426 WKEGNGLVKKLDQQASSISALSTWKDHLKHIVWPGEADSVPKGWQIPTKGKKLRIGVPKRTGYTD 490

  Fly   295 RIR-TLDSSGMGQLRWDGVEFRLLTMISKRLNFSIDITETPTR-----------------SNTRG 341
            .:: |.|.               :|..:....|.||..|...|                 ..|.|
plant   491 LVKVTRDP---------------ITNSTVVTGFCIDFFEAVIRELPYDVSYEFIPFEKPDGKTAG 540

  Fly   342 VVDTIQEQIIERTVD--IGMSGIYITQERLMDSAM-----SVGHSPDCAAFITLASKALPKYRAI 399
            ..:.:..|:.....|  :|.:.|.:.:...:|...     .||      ..:.:.......|...
plant   541 NYNDLVYQVYLGRYDAVVGDTTILVNRSSYVDFTFPFIKSGVG------LIVEMTDPVKRDYILF 599

  Fly   400 MGPFQWPVWV-ALICVYLGG--IFPIVFTDRLTLSHLMGNWG----EVENMFWYVFGMFTNA--- 454
            |.|..|.:|: :.|..:|.|  ::.:.:......|      |    :...:.|:.|.....|   
plant   600 MKPLSWKLWLTSFISFFLVGCTVWVLEYKRNPDFS------GPPRFQASTICWFAFSTMVFAPRE 658

  Fly   455 --FSFTGKYSWSNTRKNSTRLLIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLL---- 513
              |||     |:       |.|:.|::...:::|..||.|:.:.:|......|:.|:..||    
plant   659 RVFSF-----WA-------RALVIAWYFLVLVLTQSYTASLASLLTSQKLNPTITSMSSLLEKGE 711

  Fly   514 -----GLFFRVGTLNNGGWETWFQNSTHIP--TSRLYKKMEFVGSVDEGIGNVTQSFFWNYAFLG 571
                 ...|.:|.|...|    |..|:.:|  |:....::...|....|:........:...|||
plant   712 TVGYQRTSFILGKLKERG----FPQSSLVPFDTAEECDELLSKGPKKGGVSGAFLEIPYLRLFLG 772

  Fly   572 SKAQLEYLVQSNFSDENISRRSALHLSEECFALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAK 636
            .......:|                  ||.|.:...||:||..|.....:...||...:|....:
plant   773 QFCNTYKMV------------------EEPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAME 819

  Fly   637 INNEVSWVMQRSSS 650
            :  |.:|..::..|
plant   820 L--ERAWFKKKEQS 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 60/341 (18%)
Lig_chan 407..662 CDD:278489 53/267 (20%)
GLR2.3NP_001325281.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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