DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and GLR2

DIOPT Version :10

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001318239.1 Gene:GLR2 / 816231 AraportID:AT2G17260 Length:925 Species:Arabidopsis thaliana


Alignment Length:940 Identity:173/940 - (18%)
Similarity:300/940 - (31%) Gaps:311/940 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 IFGVGMCDGNNEN-EFRQKRRIV---PTFQGNPRPR---------------GELLASKFHVNSYN 90
            |||:....|...| .|:.....|   |:|.|..:.|               |.|...:..|.:..
plant    39 IFGLNTMYGETANIAFKAAEEDVNSDPSFLGGSKLRILMNDAKRSGFLSIMGALQFMETDVVAII 103

  Fly    91 FEQTNSLVGLVNKIAQEY---------LNKCPPVIYYDSFVE--KSDGLILENLFKTIPITFY-H 143
            ..||:.:..:::.:|.|.         |:.....:.:..||:  .||..::..:.:.  ||:| .
plant   104 GPQTSIMAHVLSHLANELTVPMLSFTALDPTLSPLQFPFFVQTAPSDLFLMRAIAEM--ITYYGW 166

  Fly   144 GEINADYEAKNKRFTSHIDCNCKSYILFLSDPLMTR---------------------------KI 181
            .::.|.|         :.|.|.::.:..|.|.|..|                           ||
plant   167 SDVVALY---------NDDDNSRNGVTALGDELEERRCKISYKAVLPLDVVITSPVEIIEELIKI 222

  Fly   182 LGPQTESRVVLVS--------------------RSTQWRLRDFLSSELSSN------IVNLLVIG 220
            .|  .||||::|:                    :...|....:|||.|.||      :||.::..
plant   223 RG--MESRVIVVNTFPNTGKMIFKEAERLGMMEKGYVWIATTWLSSVLDSNLPLDTKLVNGVLTL 285

  Fly   221 ESLMADPMRERPYVLYTHKLYADGLGSNTPVVL---------TSWI------------------- 257
            .....|..::|.:.    ..:.:.|.:|..:.|         |.||                   
plant   286 RLHTPDSRKKRDFA----ARWKNKLSNNKTIGLNVYGLYAYDTVWIIARAVKTLLEAGGNLSFSN 346

  Fly   258 -------KG------ALSR---------------------------------PH---INLFPSK- 272
                   ||      ||||                                 |.   |||...: 
plant   347 DAKLGSLKGEALNLSALSRFDQGSQLLDYIVHTKMSGLTGPVQFHPDRSMLQPSYDIINLVDDRV 411

  Fly   273 FQFGFAGHRFQISAANQPPFIFRIRTLDSSGMGQ----LRWDGVEF-------------RLLTMI 320
            .|.|:..:...:|..  ||..|..:..:.|...|    :.|.|...             ||...:
plant   412 HQIGYWSNYSGLSIV--PPESFYSKPPNRSSSNQHLNSVTWPGGTSVTPRGWIFRNNGRRLRIGV 474

  Fly   321 SKRLNFS-----------------IDITETPTRSNT-----------RGVVDTIQEQIIERT--- 354
            ..|.:|.                 ||:.|...:..:           .|:.:....:::.:.   
plant   475 PDRASFKDFVSRVNGSSNKVQGYCIDVFEAAVKLLSYPVPHEFIFFGDGLTNPNYNELVNKVTTG 539

  Fly   355 VD----IGMSGIYITQERLMDSAMSVGHSPDCAAFITLASKALPKYR------AIMGPFQWPVWV 409
            ||    :|...|...:.|::|.......|    ..:.:|    |..|      |.:.||..|:|.
plant   540 VDFDAVVGDIAIVTKRTRIVDFTQPYIES----GLVVVA----PVTRLNENPWAFLRPFTLPMWA 596

  Fly   410 ALICVYLGGIFPIVFTDRLTLSHLMGN------WGEVENMFWYVFG-MFTNAFSFTGKYSWSNTR 467
            .     ....|.||......|.|.:.:      ..::..:.|:.|. ||         :|...|.
plant   597 V-----TASFFVIVGAAIWILEHRINDEFRGPPRRQIITILWFTFSTMF---------FSHRETT 647

  Fly   468 KNSTRLLIGAYWLFTI-IITSCYTGSIIAFVTLPAFPDTVDSVLDLLGLFFRVGTLNNGGWETWF 531
            .::...::...|||.: ||||.||.|:.:.:|:......:..|..|:....|:|.......|.:.
plant   648 VSTLGRMVLLIWLFVVLIITSSYTASLTSILTVQQLNSPIKGVDTLISSTGRIGFQVGSFAENYM 712

  Fly   532 QNSTHIPTSRLYKKMEFVGSVDEGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSALH 596
            .:..:|.:|||..    :.|.:| ..|..|:        |:.|.:  :.:..:.|        |.
plant   713 TDELNIASSRLVP----LASPEE-YANALQN--------GTVAAI--VDERPYID--------LF 754

  Fly   597 LSEEC--------FALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVMQRSSSGRL 653
            ||:.|        |.....||.|||:|...:.:.:.||...::|.:.||::.  |:.:.:.|.. 
plant   755 LSDYCKFAIRGQEFTRCGWGFAFPRDSPLAVDMSTAILGLSETGELQKIHDR--WLSKSNCSSP- 816

  Fly   654 LQASSSNSLREIIQEERQLTTADTEGMFLLMALGYFLGATALVSEIVGGITNKCRQIIKRSRKSA 718
             ..|.|.       :..||......||||::.:...:.......:|:........:::......:
plant   817 -HGSQSG-------DSEQLNVHSFWGMFLVVGIACLVALFIHFFKIIRDFCKDTPEVVVEEAIPS 873

  Fly   719 ASSWSSASSGSMLRTNAEQLSHDKRKANRR 748
            ..|.......:.|....|:....||:..|:
plant   874 PKSSRLTKLQTFLAFVDEKEEETKRRLKRK 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 HisJ 287..>392 CDD:440596 23/156 (15%)
Lig_chan 405..662 CDD:459656 60/272 (22%)
GLR2NP_001318239.1 PBP1_GABAb_receptor_plant 35..427 CDD:380645 72/406 (18%)
GluR_Plant 468..808 CDD:270404 77/386 (20%)
Lig_chan 591..842 CDD:459656 66/298 (22%)

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