DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and grik1a

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:XP_009303592.1 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:619 Identity:127/619 - (20%)
Similarity:217/619 - (35%) Gaps:168/619 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 GPQTESRVVLVSRSTQW---------RLRDFLSSELSSNIVNLLVIGESLMADPMRERPYVLYT- 237
            ||    |.:.:.:..||         ...|.|..|.:.::::|...|.:........||..|:| 
Zfish   359 GP----RFMNLFKEAQWDGLTGRIVLNKTDGLRKEFNLDLISLKEDGTAKRVADGASRPNKLWTK 419

  Fly   238 -----------------HKLYADGLGSNTPVVLTSWIKGALSRPHINLFPSKFQFGFAGHRFQIS 285
                             :|...|.|.:.|.:|.|     .|..|::                   
Zfish   420 IGVWNSYTGLNLTEIKDNKNITDSLANRTLIVTT-----ILENPYV------------------- 460

  Fly   286 AANQPPFIFRIRTLDSSGMGQLRWDGVEFRLLTMISKRLNFSIDITETPT----RSNTRGVVDTI 346
                     ..:..|....|..|::|....||..:|..|.|:.::.....    ..|.:|..:.:
Zfish   461 ---------MYKKSDKVLYGNDRFEGYCLDLLKELSNILGFTYEVKLVTDGKYGAQNDKGEWNGM 516

  Fly   347 QEQIIERTVDIGMSGIYIT--QERLMDSAMSVGHSPDCAAFITLASKAL--------PKYRAIMG 401
            ..::|:...|:.::.:.||  :|:::|.:         ..|:||....|        |...:.:.
Zfish   517 VRELIDHIADLAVAPLTITYVREKVIDFS---------KPFMTLGISILYRKPNGTNPGVFSFLN 572

  Fly   402 PFQWPVWVALICVYLGGIFPIVFTDRLT-----LSHLMGNWGE-VENMFWYVFGMFTNAFSFTGK 460
            |....:|:.::...||....:....|.|     ..|......| |||.|..:..::....:...:
Zfish   573 PLTPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAALMRQ 637

  Fly   461 YSWSNTRKNSTRLLIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLL-GLFFRVGTLNN 524
            .|....:..|||:|.|.:|.||:||.|.||.::.||:|:......:||..||. ......|.:.:
Zfish   638 GSELMPKALSTRILGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTRIEYGAVRD 702

  Fly   525 GGWETWFQNSTHIPTSRLYKKM-EFVGS------VDEGIGNVTQSFFWNYAFLGSKAQLEYLVQS 582
            |...|:|:.| .|.|   |:|| .|:.|      |......:|:....:||.|.....:||:.|.
Zfish   703 GSTMTFFKKS-KIST---YEKMWAFMSSRKNTALVKNSKDGITRVLTTDYALLMESTSIEYITQR 763

  Fly   583 NFSDENISRRSALHLSEECFALFQIGFLF---------PRESVYKIKIDSMILLAQQSGLIAKIN 638
            |.:                  |.|:|.|.         |..|.|:.|:...||..|:.|.: .:.
Zfish   764 NCN------------------LTQVGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQEEGKL-HMM 809

  Fly   639 NEVSWVMQRSSSGRLLQASSSNSLREIIQEERQLTTADTEGMFLLMALGYFLGATALVSEIVG-- 701
            .|..|             ..:....|..:|...|...:..|:|:::|.|..|.....:.|.:.  
Zfish   810 KEKWW-------------RGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKS 861

  Fly   702 -------------------GITNKCRQII-KRSR 715
                               ||:.:|.:.: ||.|
Zfish   862 HKNSDIEECVSFSAVMEDLGISLRCHKALRKRGR 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 75/321 (23%)
Lig_chan 407..662 CDD:278489 67/277 (24%)
grik1aXP_009303592.1 Periplasmic_Binding_Protein_Type_1 37..432 CDD:299141 14/76 (18%)
ANF_receptor 57..398 CDD:279440 8/42 (19%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:304360 95/446 (21%)
Lig_chan 577..846 CDD:278489 73/304 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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