DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and si:ch211-251b21.1

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001138274.1 Gene:si:ch211-251b21.1 / 571720 ZFINID:ZDB-GENE-060809-5 Length:458 Species:Danio rerio


Alignment Length:490 Identity:99/490 - (20%)
Similarity:185/490 - (37%) Gaps:129/490 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 DGVEFRLLTMISKRLNFSIDI--------TETPTRSNTRGVVDTIQEQIIERTVDIGMSGIYITQ 366
            :|....:|:.||.:|.|..|:        .:|....|..|::.    :::....||.::.:.:|.
Zfish    44 EGFCIDMLSAISNKLGFKYDVHLVKDGRYGKTDDSGNWNGMIG----EVVRGEADIAVAPLTLTA 104

  Fly   367 ER--LMDSA---MSVGHS--------PDCAAFITLASKALPKYRAIMGPFQWPVWVALICVYLGG 418
            :|  ::|.:   |..|.|        .|.:.|::|           :..|...:|:.::..||..
Zfish   105 QREAVVDMSKPFMQTGLSFIMRKDLGSDDSQFLSL-----------LKLFSTEMWMGVLVAYLLT 158

  Fly   419 IFPIVFTDRL---------------TLSHLMGNWGEVENMFWYVFGMFTNAFSFTGKYSWSNTRK 468
            ...|....|:               ||||          .|||..|    |.:..|  :..:.:.
Zfish   159 SICIFLVSRISPCEWEQPEKDNNSFTLSH----------SFWYTVG----ALTLQG--AGPHPKA 207

  Fly   469 NSTRLLIGAYWLFTIIITSCYTGSIIAF-------VTLPAFPDTVD-SVLDLLGLFFRVGTLNNG 525
            .|.|::...:|:|::::.:||..::..:       :::..|.|..: :|::       .||:.:.
Zfish   208 LSGRVITSIWWIFSLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNVIE-------YGTIKDS 265

  Fly   526 GWETWFQNSTHIPTSRLYKKMEFVGSVD----EGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSD 586
            ....:|:||.:....|:|:.::...|..    ||.....:.   ||||:|....|         |
Zfish   266 SSFNFFKNSNNPTYHRIYEHIKEAQSYSLNAAEGFRRAQKG---NYAFIGESVSL---------D 318

  Fly   587 ENISRRSALHLSEECFALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKINNE--VSWVMQRSS 649
            ..::|...|..:.|...:.......|..|.....:...||...:||.:....::  .|..:.:.|
Zfish   319 LAVARYCNLTRAPEIIGMRGYSIAAPLGSPLIKNLSVAILRLSESGELDYFRSKWWASSCVAKDS 383

  Fly   650 SGRLLQASSSNSLREIIQEERQLTTADTEGMFLLMALGYFLGATALVSEIVGGITNKCRQIIKRS 714
            .|..|:.:|                  .:|:|||:|.|..||....:.|:..    |.|::....
Zfish   384 KGAPLKPAS------------------LKGVFLLLAFGLGLGIFLALMELAA----KSRKVANSE 426

  Fly   715 RKSAASSWSSASS----GSMLRTNAEQLSHDKRKA 745
            :||..|..|:..|    |..:.|..   |.:|.||
Zfish   427 QKSCCSVMSAELSQRFRGGEVATPE---SSEKNKA 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 62/320 (19%)
Lig_chan 407..662 CDD:278489 55/283 (19%)
si:ch211-251b21.1NP_001138274.1 PBP2_iGluR_non_NMDA_like 25..375 CDD:270403 72/380 (19%)
Lig_chan 146..396 CDD:278489 55/302 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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