DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and grin2aa

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:XP_021329529.1 Gene:grin2aa / 563297 ZFINID:ZDB-GENE-070424-129 Length:1460 Species:Danio rerio


Alignment Length:844 Identity:146/844 - (17%)
Similarity:267/844 - (31%) Gaps:244/844 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WVALVLFTAQAFSIEGDRSASYQEKCISRRLINHYQLNKEIFGVGMCDGNNENEFRQKRR----- 64
            |....:.|..|  ::||.....|.|.:...::..|           |..:......::.|     
Zfish   195 WDLQHIITLDA--VDGDSRTQIQLKKVQSPVVLLY-----------CSKDEAAYILEEARSLGLT 246

  Fly    65 ------IVPTF-QGNPR------PRGELLASKFHVNSYNFE-QTNSLVGLVNKIAQEYLNK---- 111
                  |||:. .|||.      |.| :::..:....|..| :....:|::...|...|.:    
Zfish   247 GFGYIWIVPSLTTGNPEITPDTFPSG-MISVSYDDWDYPLEARVRDGLGIITTAAAAMLEEFGDI 310

  Fly   112 ------CPPVIYYDSFVEKSDGLILENLFKTIPITFYHGEINADYEAKNKRFTSHIDCNCKSYIL 170
                  |     |.. :||:         |..|...:...:|..::.|:..||..          
Zfish   311 PEAKTSC-----YGQ-MEKT---------KLPPSALHKYMMNVTWDGKDLSFTED---------- 350

  Fly   171 FLSDPLMTRKILGPQTESR--VVLVSRSTQW-------------------RLRDFLSSELSSNIV 214
                        |.|...:  |:::::..:|                   |...|..:|...|.:
Zfish   351 ------------GYQVHPKLVVIVLNKDREWEKMGKWENQSLTLKYPVWPRFNSFGDAETDDNHL 403

  Fly   215 NLLVIGESLMADPMRERPYVLY--THKLYADGLGSNTPVVLTSWIKGALSRPHINLFPSKFQFGF 277
            .::.         :.|:|:|:.  ..:|....:.::.|           .|.||           
Zfish   404 TIVT---------LEEKPFVIVENVERLTGTCMRNSVP-----------CRKHI----------- 437

  Fly   278 AGHRFQISAANQPPFIFRIRTLDSSGMGQLR-WDGVEFRLLTMISKRLNFSID---ITETPTRSN 338
                             :..|.:..|....: ..|....:|..|::.:.|:.|   :|.......
Zfish   438 -----------------KDNTTEGGGTYIKKCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKK 485

  Fly   339 TRGVVDTIQEQIIERTVDIGMSGIYITQERLMDSAMSVGHSPDCAAFITLASKALPKYRAIMGPF 403
            ...|.:.:..:::.:...:.:..:.|.:||......||.......:.:...|.......|.:.||
Zfish   486 INNVWNGMVGEVVNKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPF 550

  Fly   404 QWPVW----VALICVYLGGIF------PIVFTDRLTL-------SHLMGNWGEVENMFWYVFGMF 451
            ...||    |.|:.|....:|      |:.|...|..       |..||      ...|.::|:.
Zfish   551 SASVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMG------KAVWLLWGLV 609

  Fly   452 TNAFSFTGKYSWSNTRKNSTRLLIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLLGLF 516
                 |.......|.:..:::.::..:..|.:|..:.||.::.||:....|.|.|..:.|  ..|
Zfish   610 -----FNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSD--KKF 667

  Fly   517 ---------FRVGTLNNGGWETWFQNSTHIPTSRLYK-KMEFVGSVDEGIGNVTQSFFWNYAFLG 571
                     ||.||:.||..|...:.  :.|....|. |....|..|..:...|...   .||:.
Zfish   668 QSPYSYSPPFRFGTVPNGSTERNIRK--NYPDMHQYMVKYHQTGVNDALVSLKTGKL---DAFIY 727

  Fly   572 SKAQLEYLVQSNFSDENISRRSALHLSEECFALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAK 636
            ..|.|.|:...:...:.::..|..     .||....|....:.|::|..:|..||.....|.:.:
Zfish   728 DAAVLNYMAGRDEGCKLVTIGSGY-----IFATTGYGIALQKGSLWKRPVDLAILAIIGDGEMEE 787

  Fly   637 INNEVSWVMQRSSSGRLLQASSSNSLREIIQEERQLTTADTEGMFLLMA---------------- 685
            :  |..|          |.....|...|::..  ||...:..|:|.::|                
Zfish   788 L--EAQW----------LTGICHNEKNEVMSS--QLDVDNMAGVFYMLATAMGLSLITFVWEHLF 838

  Fly   686 --------LGYFLGATALVSEIVGGITNKCRQI-IKRSRKSAASSWSSASSGSMLRTNAEQLSH 740
                    .|...|...|:..|..||.:....: |...:||:...:|..|:...|..:|:|:::
Zfish   839 YWRLRYCFTGVCSGTPGLLFSISRGIWSCIHGVHIDMKKKSSDLDFSPQSNMLKLIKSAKQMTN 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 63/324 (19%)
Lig_chan 407..662 CDD:278489 59/281 (21%)
grin2aaXP_021329529.1 PBP1_iGluR_NMDA_NR2 33..389 CDD:107373 37/244 (15%)
PBP2_iGluR_NMDA_Nr2 400..799 CDD:270436 85/481 (18%)
NMDAR2_C 836..1460 CDD:313729 14/67 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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