DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and grid2

DIOPT Version :10

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:1035 Identity:178/1035 - (17%)
Similarity:328/1035 - (31%) Gaps:408/1035 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 EIFGVGMCDGNNENEFRQKRRIVPTFQ----GNP----------RPRGELLASKFHVNSYNFEQT 94
            |:|.:.:.|.|..||..:..:|..:.:    .||          ..||.|..    |:|......
Zfish    42 EVFRMAVADLNLNNEILETEKITVSVEFVDGNNPFQAVQEACELMNRGILAL----VSSIGCMSA 102

  Fly    95 NSLVGLVNKIAQEYL-----------NKCPP---------------------------------- 114
            .||..|.:.:...:|           :.|||                                  
Zfish   103 GSLQSLADAMHIPHLFIQRAPAGTPRSSCPPTTRAQPDDYTLFVRPPVYLNDVIFQVVMEYTWQK 167

  Fly   115 -VIYYDS------------------------FVEKSDGLILENLFKTIPITFYHGEINADYEAKN 154
             :|:||:                        .||.:..:::..:|:|:.:...|           
Zfish   168 FIIFYDTDYDIRGIENFLDQTSQQGMDVSLQKVESNINMMITGMFRTMRVEELH----------- 221

  Fly   155 KRFTSHIDCNCKSYILFLSDPLMTRKILGPQTESRVVLVSRSTQWRLRDFLSSELSSNIVNLLV- 218
             |:...:    :..:||:| |...:..:....|:.  ||:...||.:   ::.|:|...|..|| 
Zfish   222 -RYRDTL----RRAVLFMS-PATAKAFITEVVETN--LVAFDCQWII---INEEISDMDVQELVM 275

  Fly   219 --IG--------------------------ESLMADPMRERPYVL-YTHKLYADGLGSNTPVVLT 254
              ||                          .:.:.||...:..:| .|::...|     |.::|.
Zfish   276 KSIGRLTLVRQTFPLPQNTSQRCVRNNHRINTSLCDPKDPKAQMLEITNRYIYD-----TVLLLA 335

  Fly   255 S--------------------------WIKG-----ALSRPHINLFPSKFQFGFAGH----RFQI 284
            :                          |..|     .:.:..::...|..:|...|.    .|:|
Zfish   336 NTFHRKLEDRKWHSMASLSCIRKGSKPWQGGKSMLETVKKGGVSGLTSLLEFNDNGSNPNIHFEI 400

  Fly   285 SAANQPPFIFRIRTLDSSGMGQLR---WD-------------------GVEFRLLT-------MI 320
            ...|..         :..|.|..|   ||                   ||..|::|       |:
Zfish   401 LGTNYG---------EDRGRGVSRLATWDPIHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMV 456

  Fly   321 SKRL--------NFSIDITETPTR------------------SNTRGVVDTIQEQIIERTVDIGM 359
            |:.:        .||||:.:....                  ....|..:.:..:::.:..|:|:
Zfish   457 SENVLGKPKKYQGFSIDVLDALANYLGFKYEIYVAPDHKYGSQQADGTWNGLIGELVFKRADVGL 521

  Fly   360 SGIYITQE---------RLMDSAMSVGHSPDCAAFITLASKALPKYRAIMGPFQWPVWVALI-CV 414
            |.:.||.|         |.||.::.|        .:..|.:.:..: |.:.||...:|..:. .|
Zfish   522 SALTITPERESVVDFTTRYMDYSVGV--------LLRKAERTVDMF-ACLAPFDLSLWACIAGTV 577

  Fly   415 YLGGIFPIVFTDRLTLSHLMGNW--------GEVE-----NMFWYVFGMFTNAFSFTGKYSWSNT 466
            .|.|          ||.:|: ||        |.|.     |..|:|:|.|...   .|:..::..
Zfish   578 LLVG----------TLVYLL-NWLNPPRLPMGSVSSTTLYNSMWFVYGSFVQQ---GGEVPYTTL 628

  Fly   467 RKNSTRLLIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLL-GLFFRVGT--------- 521
               :||:::|.:|||.:|:.|.||.::.||:|:....:::.|:.||. ......||         
Zfish   629 ---ATRMMMGVWWLFALIVISSYTANLAAFLTISRIENSIQSLQDLAKQTDLPYGTVLDSAVYDQ 690

  Fly   522 LNNGGWETWFQNSTHIPTSRLYKKMEFVGSVD-------EGIGNVTQSFFWNYAFLGSKAQLEYL 579
            :.:.|...:.::..:   |::::.:...|..:       |||..|.   :..:||:...|.|||:
Zfish   691 VRSKGMNPFERDPMY---SQMWRMINRTGGAENNVEESKEGIRKVK---YGRFAFVWDAAVLEYV 749

  Fly   580 VQSNFSDENISRRSALHLSEECFALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSWV 644
            .   .:||:.|    |:......|....|......|.|:......||..||:|.:..:  ::.|.
Zfish   750 A---INDEDCS----LYTVSNNVADRGYGMAMQHGSPYRDIFSQRILELQQNGDMDIL--KLKWW 805

  Fly   645 MQRS-----------SSGRLLQASSSNSLREIIQEERQLTTADTEGMFLLMALGYFLGATALVSE 698
            .:.|           .||..|...|                  ..|:|.::|.|..|  :.|::.
Zfish   806 PRDSPCDLYSPVGTRKSGSALDIHS------------------FAGVFFVLAAGVVL--SCLIAT 850

  Fly   699 IVGGITNKCRQIIKRSRKSAASSWSSASSGSMLRTNAEQLSHDKRKANRREAAEVAQKMSFGMRE 763
            :                    .:|.:...||.:.:..:....|....:.|..:...:..|     
Zfish   851 V--------------------ETWWTRRKGSRVPSKEDDKEIDLEHLHHRVNSLCTEDES----- 890

  Fly   764 LNLTRATLREIYGSYGAPETDHGQLDIVHTEFPNSSAKLNNIEDEESREALESLQRLDEF 823
                                       .|.:|..||..|..::.:....|.::|:::.:|
Zfish   891 ---------------------------PHKQFSTSSIDLTPLDMDSLPAARQALEQISDF 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 HisJ 287..>392 CDD:440596 28/168 (17%)
Lig_chan 405..662 CDD:459656 67/298 (22%)
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..429 CDD:380614 66/426 (15%)
PBP2_iGluR_delta_2 440..806 CDD:270449 87/406 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.

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