DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and Ekar

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:759 Identity:159/759 - (20%)
Similarity:296/759 - (38%) Gaps:162/759 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SRRLINH------YQLNKEIFGVGMCDGNNENEFRQKRRIVPTFQGNPRPR-----------GEL 79
            |::|:|:      ..||...||:   ....||......::..:|.|....|           .|.
  Fly   129 SKQLVNYAFNDVIQYLNWTRFGI---LHEKENGIINLHQLSRSFHGEVHMRQVSRDSYVSALNEF 190

  Fly    80 LASKFHVNSYNFEQTNSLVGLVNKIAQEYLNKCPPVIYYDSF-VEKSDGLILENL-FKTIPITFY 142
            ...:.| |......:|.:..|:..|.|:.:|:......:.|| :|..|   ||:. :..:.||.:
  Fly   191 KGKEIH-NIIIDTNSNGISILLKNILQQQMNEYKYHYLFTSFDLETYD---LEDFKYNFVNITSF 251

  Fly   143 HGEINADYEAKN-----KRFTSHI------DCNCKSYILFLSDP-LMTRKI----LGPQTESRVV 191
            .....||...|.     ..::.||      :.:.|...:..|:| ||...:    :|.||     
  Fly   252 RLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILESEPALMFDSVYVFAIGLQT----- 311

  Fly   192 LVSRSTQWRLRDFLSSELSS-----NIVNLL-VIGESLMADPMRERPYVLYTHKLYADGLGSNTP 250
             :.:|....|.:....|.:|     :::|.| .:....:..|::.:.......||....|..::.
  Fly   312 -LEQSHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQFKLDLIKLKQHSI 375

  Fly   251 VVLTSWIKGALSRPHINLF-PSKFQFGFAGHRFQISAAN---------QPPFIFRIRTLDSSGMG 305
            |.:..|    ....|:|:. ||.|        |...:.|         :.|::  :.....:..|
  Fly   376 VKVGEW----TPHGHLNITEPSMF--------FDAGSMNVTLVVITILETPYV--MMHYGKNFTG 426

  Fly   306 QLRWDGVEFRLLTMISKRLNFS--IDI-------TETPTRSNTRGVVDTIQEQIIERTVDIGMSG 361
            ..|:.|....:|..||:.:.|.  :|:       .:.|......|:|    .|:::...|:.:..
  Fly   427 NERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMV----AQLMKYKADLAVGS 487

  Fly   362 IYIT--QERLMDSA---MSVGHSPDCAAFITLASKALPKYRAIMGPFQWPVWVAL--------IC 413
            :.||  :|.::|..   |::|.|    ....:.:....:..:.|.|....:|:.:        :|
  Fly   488 MTITYARESVIDFTKPFMNLGIS----ILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLC 548

  Fly   414 VYL-GGIFPIVF-----TDRLTLSHLMGNWGEVENMFWYVFGMFTNAFSFTGKYSWSNTRKNSTR 472
            :|: |.:.||.:     .|...:|  :||...:.:.||:..|.|..  .....|    .|..|||
  Fly   549 IYIVGKLSPIEWKCINACDLENIS--IGNQFSLTDSFWFTIGTFMQ--QSPDIY----PRAMSTR 605

  Fly   473 LLIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLLG-LFFRVGTLNNGGWETWFQNSTH 536
            ::...:..|::||.:.||.::.||:|.....:.:::..||.. .....|||::|...|:|::|..
  Fly   606 IISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTFFRDSVI 670

  Fly   537 IPTSRLYKKME------FVGSVDEGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSAL 595
            ....::::.|:      |..:.::||..|.|.   |||||.....|:|:||   .|.|:::...|
  Fly   671 ETYKKIWRSMDNKKPSAFTTTYEDGIKRVNQG---NYAFLMESTMLDYIVQ---RDCNLTQIGGL 729

  Fly   596 HLSEECFALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKI------NNEVSWVMQRSSSGRLL 654
             |..:.:     |...|:.|.::.||...||..|:.|.|..:      |.:.:...:.:|     
  Fly   730 -LDTKGY-----GIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNTDETCTRKNTS----- 783

  Fly   655 QASSSNSLREIIQEERQLTTADTEGMFLLMALGYFLGATALVSE 698
            :.|.:||          |......|:|:::..|..:.|.....|
  Fly   784 KQSKANS----------LGLESIGGVFVVLIAGIIVAAVVAFFE 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 74/328 (23%)
Lig_chan 407..662 CDD:278489 69/281 (25%)
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 54/275 (20%)
ANF_receptor 39..371 CDD:279440 50/254 (20%)
PBP2_iGluR_Kainate 402..771 CDD:270432 89/398 (22%)
Lig_chan 533..807 CDD:278489 73/308 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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