DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and GluRIIB

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_523485.3 Gene:GluRIIB / 33789 FlyBaseID:FBgn0020429 Length:913 Species:Drosophila melanogaster


Alignment Length:823 Identity:169/823 - (20%)
Similarity:284/823 - (34%) Gaps:211/823 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ELLASK-FHVNSYN--FEQTNSLVGLVNKIAQEYLNKCPPVIYYDSFVEKSDGLILENLFKTI-- 137
            ::|||| |...|:.  :|:::.|:.|.:.:|.:.|:|..  |....|....|..|   |:|.|  
  Fly   147 DILASKTFDWKSFTIAYERSSHLIRLQHILAWKQLHKAG--IKMQEFERGDDYRI---LWKRINN 206

  Fly   138 ----------PITFYHGEINAD--YE---AKNKRFTSHIDCNCKSYILFLS-------DPLMTRK 180
                      |.......|||.  |.   :.|..|.:::|.:......|.|       ..:..|.
  Fly   207 AREKFVLLDCPSDILVDVINASIGYNMTGSFNHLFLTNLDTHLSGIDGFYSRDFTVAVAAVRIRT 271

  Fly   181 ILGPQTESRVVLVSRSTQWRLRDFLSSELSSNIV----NLLVIGE-------------------- 221
            .:.|.....:.:...|...|.....|..:..:||    .||.|.:                    
  Fly   272 YVPPPVHDEIDVFDNSVDTRFSSLGSQLVYDSIVLFYNALLEISQRPGFYIPNFSCGRGFWQPGP 336

  Fly   222 ------SLMADPMRERPYVLYTHKLYADG------LGSNTPV---VLTSWIK------------- 258
                  ..:...|.:.|:.....::.|||      |....|:   |...|.|             
  Fly   337 RLVEQMKQITPKMVKPPFKTQRLQINADGQREDFNLEVYNPIIDRVTHIWNKEFQLVDFEKLREN 401

  Fly   259 --GALSRPHINLFPSKFQFGFAGHRFQISA-ANQPPFIFRIRTLDSSGMGQLRWDGVEFRLLTMI 320
              .||.:..:.   :|..|.....|:.::. ..:|.|.:|.........|..|::|....|:.|:
  Fly   402 STQALKQKRLQ---NKEDFSQKPIRYTVATRVGKPYFSWREEPEGVHYEGNERFEGYAVDLIYML 463

  Fly   321 SKRLNFSIDITETPTRSNTRGVVDT-------IQEQIIERTVDIGMSGIYITQER--LMDSA--- 373
            ::...|  |....|.|.|..|..|.       |..|:|:....||:..:.|||.|  ::|..   
  Fly   464 AQECKF--DFNFEPVRDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPF 526

  Fly   374 MSVGHSPDCAAFITLASKALPKYR----AIMGPFQWPVWVALICVYLGGIFPIVFTDRLTLSHLM 434
            |.:|        |::.|...|..:    |.:.|:...||:.::...:...|.::||.|:.    .
  Fly   527 MQLG--------ISILSYKEPPPKADIYAFLNPYNAEVWLFVMIAMMITAFALIFTGRID----Q 579

  Fly   435 GNWGE-VENM---------------FWYVFGMFTNAFSFTGKYSWSNTRKNSTRLLIGAYWLFTI 483
            ..|.: |||:               .|.|.|...|      :......|....|||...:|:|.:
  Fly   580 YEWDQPVENVNREMERQNIWHLSNALWLVLGSMLN------QGCDLLPRGLPMRLLTAFWWIFAL 638

  Fly   484 IITSCYTGSIIAFVTLPAFPDTVDSVLDLLGL-FFRVGTLNNGGWETWFQNSTHIPTSRLYKKM- 546
            :|:..|...:.||:|.......:.|:.||:.. ..:.||:..|....:|..|........:.|| 
  Fly   639 LISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVYFSESNDTDNRMAWNKML 703

  Fly   547 -----EFVGSVDEGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSALHLSEECFALFQ 606
                 .|..:.:||:..|..| ...||||.....|:|.||.|.....|.         |.|....
  Fly   704 SFKPDAFTKNNEEGVDRVKLS-KGTYAFLMETTNLQYYVQRNCELTQIG---------ESFGEKH 758

  Fly   607 IGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVMQRSSSGRLLQASSSNSLREIIQEERQ 671
            .|...|..:.::..:...||...:.|.:.|:.|:  |.....|       :..:::..|  ::.|
  Fly   759 YGIAVPLNADFRSNLSVGILRLSERGELFKLRNK--WFNSNES-------TCDSNVPTI--DDGQ 812

  Fly   672 LTTADTEGMFLLMALGYFLGATALVSEIVGGI---------------------------TNKCRQ 709
            .......|:|:::.:|..:|....|:|.:..:                           |.|...
  Fly   813 FDMDSVGGLFVVLIVGVVVGLVIGVAEFLWHVQRISVKEKIPPMLALKAEFYFVIRFWLTRKPLH 877

  Fly   710 IIKRSRKSAASSWSSASSGSMLRTNAEQL----SHDKRKANRR 748
            ..::||.|.::.:||          .||:    |..|:|..||
  Fly   878 TYRQSRDSTSTGYSS----------LEQITSASSAKKKKKTRR 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 80/332 (24%)
Lig_chan 407..662 CDD:278489 61/277 (22%)
GluRIIBNP_523485.3 PBP1_iGluR_Kainate 26..393 CDD:107377 49/250 (20%)
ANF_receptor 41..378 CDD:279440 45/235 (19%)
PBP2_iGluR_Kainate 422..795 CDD:270432 93/404 (23%)
Lig_chan 555..822 CDD:278489 64/297 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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