DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and GRIK1

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001317923.1 Gene:GRIK1 / 2897 HGNCID:4579 Length:949 Species:Homo sapiens


Alignment Length:654 Identity:144/654 - (22%)
Similarity:248/654 - (37%) Gaps:151/654 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 LGPQTESRVVLVSRSTQWRLRDFLSSELSSN------------IVNLLVIGESLMADPMRERPYV 234
            |||    |.:.:.:..:|   |.|:..::.|            |::|...|....|..:.:..|.
Human   356 LGP----RFMNLIKEARW---DGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYK 413

  Fly   235 LYTHKLYADGL-GSNTPVVLTSWIKGALSRPHINLFPSKFQFGFAGHRFQISAANQPPFIFRIRT 298
            :: .|:   |: .||:.:.:|...|...|    |:..|     .|.....::...:.|::. .|.
Human   414 VW-KKI---GIWNSNSGLNMTDSNKDKSS----NITDS-----LANRTLIVTTILEEPYVM-YRK 464

  Fly   299 LDSSGMGQLRWDGVEFRLLTMISKRLNFSIDITETPT----RSNTRGVVDTIQEQIIERTVDIGM 359
            .|....|..|::|....||..:|..|.|..|:...|.    ..|.:|..:.:.:::|:...|:.:
Human   465 SDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAV 529

  Fly   360 SGIYIT--QERLMDSAMSVGHSPDCAAFITLASKAL--------PKYRAIMGPFQWPVWVALICV 414
            :.:.||  :|:::|.:         ..|:||....|        |...:.:.|....:|:.::..
Human   530 APLTITYVREKVIDFS---------KPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLA 585

  Fly   415 YLGGIFPIVFTDRLTL------------SHLMGNWGEVENMFWYVFGMFTNAFSFTGKYSWSNTR 467
            .||....:....|.|.            |.::.|...:.|.||:..|      :...:.|....:
Human   586 CLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG------ALMQQGSELMPK 644

  Fly   468 KNSTRLLIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLL-GLFFRVGTLNNGGWETWF 531
            ..|||::.|.:|.||:||.|.||.::.||:|:......:||..||. ......|.:.:|...|:|
Human   645 ALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFF 709

  Fly   532 QNSTHIPTSRLYKKM----------EFVGSVDEGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSD 586
            :.| .|.|   |:||          ..|.:.||||..|..:   :||.|.....:||:.|.|.: 
Human   710 KKS-KIST---YEKMWAFMSSRQQTALVRNSDEGIQRVLTT---DYALLMESTSIEYVTQRNCN- 766

  Fly   587 ENISRRSALHLSEECFALFQIGFLF---------PRESVYKIKIDSMILLAQQSGLIAKINNEVS 642
                             |.|||.|.         |..|.|:.||...||..|:.|.: .:..|..
Human   767 -----------------LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKL-HMMKEKW 813

  Fly   643 WVMQRSSSGRLLQASSSNSLREIIQEERQLTTADTEGMFLLMALGYFLGATALVSEIVGGITNKC 707
            |             ..:....|..:|...|...:..|:|:::|.|..|.....:.|         
Human   814 W-------------RGNGCPEEDNKEASALGVENIGGIFIVLAAGLVLSVFVAIGE--------- 856

  Fly   708 RQIIKRSRKSAASSWSSASSGSMLRTNAEQLSHDKRKANRREAAEVAQKMSFG--MRELNLTRAT 770
              .|.:|||:........||........:...|.::|    ::..|.:.:||.  |.||.::...
Human   857 --FIYKSRKNNDIEQKGKSSRIRFYFRNKVRFHGRKK----QSLGVEKCLSFNAIMEELGISLKN 915

  Fly   771 LREI 774
            .::|
Human   916 QKKI 919

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 80/330 (24%)
Lig_chan 407..662 CDD:278489 70/286 (24%)
GRIK1NP_001317923.1 Periplasmic_Binding_Protein_Type_1 35..430 CDD:324556 17/84 (20%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:328725 97/423 (23%)
Glutamate binding. /evidence=ECO:0000250 531..533 0/1 (0%)