DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir21a and Grik5

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:XP_006228444.1 Gene:Grik5 / 24407 RGDID:2735 Length:980 Species:Rattus norvegicus


Alignment Length:839 Identity:177/839 - (21%)
Similarity:305/839 - (36%) Gaps:185/839 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KCISR--RLINHYQLNKEIFGVGMCDGNNE-----NEFRQKRRIVPTFQGNPRPRGELLASKFHV 86
            :|:.|  .|:..:.::||...|.|.|.:.:     .|.|..:........|        ||..|:
  Rat   169 ECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDAN--------ASISHL 225

  Fly    87 NSYNFEQTNSLVGLVNKIAQEYLNKCP-PVIYYDSFVEKSDGLILENLFKTIPITFYHGEINADY 150
                ..:..|.:|:.:...:..|.... |:::.|..||.|..::..::|.| ...||...:    
  Rat   226 ----VLRKASELGMTSAFYKYILTTMDFPILHLDGIVEDSSNILGFSMFNT-SHPFYPEFV---- 281

  Fly   151 EAKNKRFTSHIDCNCKSYILFLSDPLMTRKILGPQTESRVVLVSRSTQW-RLRDFLSSELSSNIV 214
              ::...:...:|...:|    ..|.::..::   .::..|:||...:. |.::.....|:....
  Rat   282 --RSLNMSWRENCEASTY----PGPALSAALM---FDAVHVVVSAVRELNRSQEIGVKPLACTSA 337

  Fly   215 NLLVIGESLMADPMRERPYVLYTHKLYADGLGSNTPVVLTSWIKGALSRPHINLFPSKFQFG--- 276
            |:...|.||| :.:|...|...|.::..:..|..|...|....|.......|.::.|.....   
  Rat   338 NIWPHGTSLM-NYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNA 401

  Fly   277 ----------FAGHRFQISAANQPPFIFRIRTLDSSGMGQLRWDGVEFRLLTMISKRLNFSIDI- 330
                      .|.....::...:.|::.| |....:..|..|::|....:|..:::.|.|...: 
  Rat   402 TTLDINLSQTLANKTLVVTTILENPYVMR-RPNFQALSGNERFEGFCVDMLRELAELLRFRYRLR 465

  Fly   331 --------TETPTRSNTRGVVDTIQEQIIERTVDIGMSGIYITQER--LMDSAMSVGHSPDCAAF 385
                    ...|..|.|..|.:.|..|    ..|:.::...||.||  ::|.:         ..|
  Rat   466 LVEDGLYGAPEPNGSWTGMVGELINRQ----KADLAVAAFTITAEREKVIDFS---------KPF 517

  Fly   386 ITLASKAL--------PKYRAIMGPFQWPVWVALICVYLGGIFPIVFTDRLT------------- 429
            :||....|        |.|.:.:.||...||:.::..||.....:....||:             
  Rat   518 MTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRA 582

  Fly   430 LSHLMGNWGEVENMFWYVFGMFTNAFSFTGKYSWSNTRKNSTRLLIGAYWLFTIIITSCYTGSII 494
            ..|::.|...:.|..|:..|      .|..:.|....|..|||.:.|.:|.||:||.|.||.::.
  Rat   583 RPHILENQYTLGNSLWFPVG------GFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLA 641

  Fly   495 AFVTLPAFPDTVDSVLDLLG-LFFRVGTLNNGGWETWFQNSTHIPTSRLYKKME------FVGSV 552
            ||:|:......|:|..||.. .....||::.|...|:||||.:....|::..|:      ||.|.
  Rat   642 AFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKST 706

  Fly   553 DEGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSALHLSEECFALFQIGFL------- 610
            :|||..|..|   .||||......||                 |....| .|.|||.|       
  Rat   707 EEGIARVLNS---RYAFLLESTMNEY-----------------HRRLNC-NLTQIGGLLDTKGYG 750

  Fly   611 --FPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVMQRS--SSGRLLQASSSNSLREIIQEERQ 671
              .|..|.::.:|...||..|:       ||.:. :::|.  ..||        ..:|.....:.
  Rat   751 IGMPLGSPFRDEITLAILQLQE-------NNRLE-ILKRKWWEGGR--------CPKEEDHRAKG 799

  Fly   672 LTTADTEGMFLLMALGYFLGATALVSEIVGGITNKCRQIIKRSRKSAASSWSSASSGSMLRTNAE 736
            |...:..|:|:::..|..:.....|.|.:..           :|:||.|     ...|:.:...:
  Rat   800 LGMENIGGIFVVLICGLIIAVFVAVMEFIWS-----------TRRSAES-----EEVSVCQEMLQ 848

  Fly   737 QLSH-------DKRKANRREAAEVAQKMSF-GMRELNLTRATLREI-----YGSYGAPE 782
            :|.|       .:.:..||........:|. .:||:.|:...|...     .|::|.|:
  Rat   849 ELRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKLYSAGAGGDAGAHGGPQ 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 86/332 (26%)
Lig_chan 407..662 CDD:278489 75/285 (26%)
Grik5XP_006228444.1 PBP1_iGluR_Kainate_KA1_2 23..401 CDD:380616 48/258 (19%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:389745 102/419 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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