DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir21a and Grin2d

DIOPT Version :10

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:XP_036008580.1 Gene:Grin2d / 14814 MGIID:95823 Length:1345 Species:Mus musculus


Alignment Length:616 Identity:119/616 - (19%)
Similarity:220/616 - (35%) Gaps:155/616 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 RKILGPQTESRVVLVSRSTQWRLRDF-LSSELSSN--IVNLLVIGESLMADPMRERPYVLYTHKL 240
            |..|..:..:.|.:|:|..|..|||: ...||..:  ..|....||||....|.    :.:.::.
Mouse   315 RDDLARRVAAGVAVVARGAQALLRDYGFLPELGHDCRAQNRTHRGESLHRYFMN----ITWDNRD 375

  Fly   241 YA---DGLGSNTPVVLTS------W-IKGALSRPHINL-FPSKFQFGFAGHRF----------QI 284
            |:   ||...|..:|:.|      | :.|:..:..:.| :|...::|    ||          .:
Mouse   376 YSFNEDGFLVNPSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSRYG----RFLQPVDDTQHLTV 436

  Fly   285 SAANQPPFIFRIRTLDSSGMGQLRWDGVEFR---------------------------------L 316
            :...:.||:. :...|......:| |.|..|                                 :
Mouse   437 ATLEERPFVI-VEPADPISGTCIR-DSVPCRSQLNRTHSLVAPRSPPPDAPRPEKRCCKGFCIDI 499

  Fly   317 LTMISKRLNFSID---ITETPTRSNTRGVVDTIQEQIIERTVDIGMSGIYITQER---------L 369
            |..::..:.||.|   :|.........||.:.:..::..:..|:.:..:.|.:||         .
Mouse   500 LKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPF 564

  Fly   370 MDSAMSV-------GHSPDC-AAFITLASKALPKYRAIMGPFQWPVWVAL--ICVYLGGIFPIVF 424
            :::.:||       ..||.. .||..|.....|:      |:...|||.:  :|:.:..:...:|
Mouse   565 VETGISVMVARSNGTVSPSAFLAFAWLMPPMSPE------PYSPAVWVMMFVMCLTVVAVTVFIF 623

  Fly   425 ---------TDRLTLSHLMGNWGEVENMFWYVFGMFTNAFSFTGKYSWSNTRKNSTRLLIGAYWL 480
                     ....|.....|:...:....|.::     |..|.......|.|..::::::..:..
Mouse   624 EYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLW-----ALVFNNSVPVENPRGTTSKIMVLVWAF 683

  Fly   481 FTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLLGLF---------FRVGTLNNGGWETWFQNSTH 536
            |.:|..:.||.::.||:....:.|||..:.|  ..|         .:.||:.||..|...:  ::
Mouse   684 FAVIFLASYTANLAAFMIQEEYVDTVSGLSD--RKFQRPQEQYPPLKFGTVPNGSTEKNIR--SN 744

  Fly   537 IPTSRLYKKMEFVGSVDEGI-----GNVTQSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSALH 596
            .|....|........|:|.:     |.:.       ||:...|.|.|:.:.:...:.::..|.  
Mouse   745 YPDMHSYMVRYNQPRVEEALTQLKAGKLD-------AFIYDAAVLNYMARKDEGCKLVTIGSG-- 800

  Fly   597 LSEECFALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVMQRSSSGRLLQASSSNS 661
               :.||....|....:.|.:|..||  :.|.|..|     ::|:..:.:...||     ...|.
Mouse   801 ---KVFATTGYGIALHKGSRWKRPID--LALLQFLG-----DDEIEMLERLWLSG-----ICHND 850

  Fly   662 LREIIQEERQLTTADTEGMF--LLMALGYFL 690
            ..|::..  :|...:..|:|  ||:|:|..|
Mouse   851 KIEVMSS--KLDIDNMAGVFYMLLVAMGLSL 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 HisJ 287..>392 CDD:440596 25/157 (16%)
Lig_chan 405..662 CDD:459656 53/281 (19%)
Grin2dXP_036008580.1 Periplasmic_Binding_Protein_type1 <156..415 CDD:471960 26/103 (25%)
PBP2_iGluR_NMDA_Nr2 432..849 CDD:270436 79/457 (17%)

Return to query results.
Submit another query.