DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir21a and Grik5

DIOPT Version :10

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:850 Identity:177/850 - (20%)
Similarity:309/850 - (36%) Gaps:184/850 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KCISR--RLINHYQLNKEIFGVGMCDGNNE-----NEFRQKRRIVPTFQGNPRPRGELLASKFHV 86
            :|:.|  .|:..:.::||...|.|.|.:.:     .|.|..:........|......:|....::
Mouse   169 ECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRLSLNL 233

  Fly    87 NS-YNFEQTNSL----------VGLVNKIAQEYLNKCP-PVIYYDSFVEKSDGLILENLFKTIPI 139
            :| ..|.::..|          :|:.:...:..|.... |:::.|..||.|..::..::|.| ..
Mouse   234 SSPLGFPRSLPLGLSCVLQASELGMTSAFYKYILTTMDFPILHLDGIVEDSSNILGFSMFNT-SH 297

  Fly   140 TFYHGEINADYEAKNKRFTSHIDCNCKSYILFLSDPLMTRKILGPQTESRVVLVSRSTQW-RLRD 203
            .||...:      ::...:...:|...:|    ..|.::..::   .::..|:||...:. |.::
Mouse   298 PFYPEFV------RSLNMSWRENCEASTY----PGPALSAALM---FDAVHVVVSAVRELNRSQE 349

  Fly   204 FLSSELSSNIVNLLVIGESLMADPMRERPYVLYTHKLYADGLGSNTPVVLTSWIKGALSRPHINL 268
            .....|:....|:...|.||| :.:|...|...|.::..:..|..|...|....|.......|.:
Mouse   350 IGVKPLACTSANIWPHGTSLM-NYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGV 413

  Fly   269 FPSKFQFG-------------FAGHRFQISAANQPPFIFRIRTLDSSGMGQLRWDGVEFRLLTMI 320
            :.|.....             .|.....::...:.|::.| |....:..|..|::|....:|..:
Mouse   414 WYSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMR-RPNFQALSGNERFEGFCVDMLREL 477

  Fly   321 SKRLNFSIDI---------TETPTRSNTRGVVDTIQEQIIERTVDIGMSGIYITQER--LMDSAM 374
            ::.|.|...:         ...|..|.|..|.:.|..|    ..|:.::...||.||  ::|.: 
Mouse   478 AELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQ----KADLAVAAFTITAEREKVIDFS- 537

  Fly   375 SVGHSPDCAAFITLASKAL--------PKYRAIMGPFQWPVWVALICVYLGGIFPIVFTDRLT-- 429
                    ..|:||....|        |.|.:.:.||...||:.::..||.....:....||:  
Mouse   538 --------KPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPY 594

  Fly   430 -----------LSHLMGNWGEVENMFWYVFGMFTNAFSFTGKYSWSNTRKNSTRLLIGAYWLFTI 483
                       ..|::.|...:.|..|:..|      .|..:.|....|..|||.:.|.:|.||:
Mouse   595 EWYNPHPCLRARPHILENQYTLGNSLWFPVG------GFMQQGSEIMPRALSTRCVSGVWWAFTL 653

  Fly   484 IITSCYTGSIIAFVTLPAFPDTVDSVLDLLG-LFFRVGTLNNGGWETWFQNSTHIPTSRLYKKME 547
            ||.|.||.::.||:|:......|:|..||.. .....||::.|...|:||||.:....|::..|:
Mouse   654 IIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQ 718

  Fly   548 ------FVGSVDEGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSALHLSEECFALFQ 606
                  ||.|.:|||..|..|   .||||......||                 |....| .|.|
Mouse   719 SKQPSVFVKSTEEGIARVLNS---RYAFLLESTMNEY-----------------HRRLNC-NLTQ 762

  Fly   607 IGFL---------FPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVMQRS--SSGRLLQASSSN 660
            ||.|         .|..|.::.:|...||..|:       ||.:. :::|.  ..||        
Mouse   763 IGGLLDTKGYGIGMPLGSPFRDEITLAILQLQE-------NNRLE-ILKRKWWEGGR-------- 811

  Fly   661 SLREIIQEERQLTTADTEGMFLLMALGYFLGATALVSEIVGGITNKCRQIIKRSRKSAASSWSSA 725
            ..:|.....:.|...:..|:|:::..|..:.....|.|.:..           :|:||.|     
Mouse   812 CPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFIWS-----------TRRSAES----- 860

  Fly   726 SSGSMLRTNAEQLSH-------DKRKANRREAAEVAQKMSF-GMRELNLTRATLREI-----YGS 777
            ...|:.:...::|.|       .:.:..||........:|. .:||:.|:...|...     .|:
Mouse   861 EEVSVCQEMLQELRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKLYSAGAGGDAGA 925

  Fly   778 YGAPE 782
            :|.|:
Mouse   926 HGGPQ 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 HisJ 287..>392 CDD:440596 24/115 (21%)
Lig_chan 405..662 CDD:459656 75/287 (26%)
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 48/269 (18%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:473866 102/419 (24%)

Return to query results.
Submit another query.