DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and Grik4

DIOPT Version :10

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_780690.2 Gene:Grik4 / 110637 MGIID:95817 Length:956 Species:Mus musculus


Alignment Length:904 Identity:179/904 - (19%)
Similarity:307/904 - (33%) Gaps:324/904 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RLINHYQLNKEIFGVGMCDGNNE-----NEFRQKRRIVPTFQGNPRPRGELLASKFH-------- 85
            :|:..:.::|:...|.|.|...:     .|.|..:........|        ||..|        
Mouse   177 KLLRQFLISKDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHAN--------ASMSHTILLKAAE 233

  Fly    86 ---VNSY----------NFEQTNSLV---------GLVNK-----------IAQEYLNKCPPVIY 117
               |::|          :.::.:|||         .:.|:           :.|.:...|..|.:
Mouse   234 LGMVSAYYTYIFTNLEFSLQRMDSLVDDRVNILGFSIFNQSHAFFQEFSQSLNQSWQENCDHVPF 298

  Fly   118 YDSFVEKSDGLILENLFKTI---------------PIT------FYHGEINADY--EAKNKRFTS 159
            ....:  |..|:.:.::..:               |::      :.||....:|  ..:.:..|.
Mouse   299 TGPAL--SSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTG 361

  Fly   160 HIDCNCK----SYILFLSDPLMTRKILGPQTESRVVLVSRS-----TQWRLRDFLSSELSSNIVN 215
            ||:.|.|    :|.|                  :::..:|:     .||.:.:.||.:       
Mouse   362 HIEFNSKGQRSNYAL------------------KILQFTRNGFQQIGQWHVAEGLSMD------- 401

  Fly   216 LLVIGESLMADPMRERPYVLYTHKLYADGLGS---NTPVVLTSWIKGALSRPHINLFPSKFQFGF 277
                                  .:|||..:..   ||.:|:|:    .|..|::.|         
Mouse   402 ----------------------SRLYASNISDSLFNTTLVVTT----ILENPYLML--------- 431

  Fly   278 AGHRFQISAANQPPFIFRIRTLDSSGMGQLRWDGVEFRLLTMISKRLNFSIDIT-------ETPT 335
            .|:..::.                   |..|::|....:|..:::.|.|:..|.       ..|.
Mouse   432 KGNHQEME-------------------GNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGVPE 477

  Fly   336 RSNT-RGVVDTIQEQIIERTVDIGMSGIYITQER--LMDSAMSVGHSPDCAAFITLASKAL---- 393
            .:.| .|:|.    ::|.|..|:.::|:.||.||  ::|.:         ..|:||....|    
Mouse   478 ANGTWTGMVG----ELIARKADLAVAGLTITAEREKVIDFS---------KPFMTLGISILYRVH 529

  Fly   394 ----PKYRAIMGPFQWPVWVALICVYLGGIFPIVFTDRLT-------------LSHLMGNWGEVE 441
                |.|.:.:.||...||:.::..||.....:....|||             ..:|:.|...:.
Mouse   530 MGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLG 594

  Fly   442 NMFWYVFGMFTNAFSFTGKYSWSNTRKNSTRLLIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTV 506
            |..|:..|      .|..:.|....|..|||.:.|.:|.||:||.|.||.::.||:|:......:
Mouse   595 NSLWFPVG------GFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPI 653

  Fly   507 DSVLDLLG-LFFRVGTLNNGGWETWFQNSTHIPTSRLYKKM------EFVGSVDEGIGNVTQSFF 564
            :||.||.. .....||::.|...|:||||.:....|::..|      .||.|.:|||..|..|  
Mouse   654 ESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNS-- 716

  Fly   565 WNYAFLGSKAQLEYLVQSNFSDENISRRSALHLSEECFALFQIGFL---------FPRESVYKIK 620
             |||||......||..|.|.:                  |.|||.|         .|..||::.:
Mouse   717 -NYAFLLESTMNEYYRQRNCN------------------LTQIGGLLDTKGYGIGMPVGSVFRDE 762

  Fly   621 IDSMILLAQQSGLIAKINNEVSWVMQRSSSGRLLQASSSNSLREIIQEERQLTTADTEGMFLLMA 685
            .|..||..|:       ||.:..:.::...|       ....:|.....:.|...:..|:|:::.
Mouse   763 FDLAILQLQE-------NNRLEILKRKWWEG-------GKCPKEEDHRAKGLGMENIGGIFVVLI 813

  Fly   686 LGYFLGATALVSEIVGGITNKCRQIIKRSRKSAASSWSSASSGSMLRTNAEQLSHDKRKANRREA 750
            .|..:.....:.|.:                     |:              |.|.       ||
Mouse   814 CGLIVAIFMAMLEFL---------------------WT--------------LRHS-------EA 836

  Fly   751 AEVA--QKMSFGMRELNLTRATL---REIYGSYGAPETDHGQLDIVHTEFPNSSAKLNN 804
            :||:  |:|...:|.:.|.:..:   |...|  |.|.    |..::....|..:|.|:|
Mouse   837 SEVSVCQEMVTELRNIILCQDNIHPRRRRSG--GLPP----QPPVLEERRPRGTATLSN 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 HisJ 287..>392 CDD:440596 23/114 (20%)
Lig_chan 405..662 CDD:459656 76/285 (27%)
Grik4NP_780690.2 Periplasmic_Binding_Protein_type1 24..402 CDD:471960 38/281 (14%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 111/448 (25%)
QRL_CxxC_CxxC 863..927 CDD:469521 9/33 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.

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