DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and grin2ba

DIOPT Version :10

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001429729.1 Gene:grin2ba / 110438919 ZFINID:ZDB-GENE-090821-2 Length:1606 Species:Danio rerio


Alignment Length:715 Identity:137/715 - (19%)
Similarity:236/715 - (33%) Gaps:163/715 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 KTIPITFYHGEI-----NADYEAKNKRFTSHIDCNCKSYILFLSDPLMTRKILGPQTESR--VVL 192
            |..|:|..:.|:     |..:|.:|..|:..                      |.|...:  ::|
Zfish   375 KKSPMTGNNNEVLRYLMNVTFEGRNLSFSED----------------------GYQMHPKLVIIL 417

  Fly   193 VSRSTQW-RLRDFLSSELSSNIVNL----LVIGESLMAD------PMRERPYVLYTHKLYADGLG 246
            :.:..|| |:..:.:..||......    |..|.....|      .:.|.|:|:           
Zfish   418 LDKERQWDRVGKWENGSLSMKYHVWPRFELYSGPEAREDDHLSIVTLEEAPFVI----------- 471

  Fly   247 SNTPVVLTSWIKGALSRPHINLFPSKFQFGFAGHRFQISAANQPPFIFRIRTLDSSGMGQLRWDG 311
                |.....:.|...|   |..|.         |.|:.|.||        |.||:...:....|
Zfish   472 ----VEDVDPLSGTCMR---NTVPC---------RKQLKALNQ--------TQDSAVYIKRCCKG 512

  Fly   312 VEFRLLTMISKRLNFSID---ITETPTRSNTRGVVDTIQEQIIERTVDIGMSGIYITQERLMDSA 373
            ....:|..|:|.:.|:.|   :|.........|..:.:..:::.:...:.:..:.|.:||.....
Zfish   513 FCIDILKKIAKNVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVID 577

  Fly   374 MSVGHSPDCAAFITLASKALPKYRAIMGPFQWPVW----VALICVYLGGIFPIVFTDRLTLSHLM 434
            .||.......:.:...|.......|.:.||...||    |.|:.|....:|...:...:..:..:
Zfish   578 FSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWIMMFVMLLLVSAIAVFIFEYFSPVGYNRCL 642

  Fly   435 GNWGE-------VENMFWYVFGMFTNAFSFTGKYSWSNTRKNSTRLLIGAYWLFTIIITSCYTGS 492
            .:..|       :....|.::|:.     |.......|.|..::::::..:..|.:|..:.||.:
Zfish   643 ADGREAGGPSFTIGKAIWLLWGLV-----FNNSVPVQNPRGTTSKIMVSVWAFFAVIFLASYTAN 702

  Fly   493 IIAFVTLPAFPDTVDSVLDL-------LGLFFRVGTLNNGGWETWFQNSTHIPTSRLYK-----K 545
            :.||:....:.|.|..:.|.       ....||.||:.||..|...:|:.....|.:.|     .
Zfish   703 LAAFMIQEEYVDQVSGLSDKKFQNPNDFSPPFRFGTVPNGSTERNIRNNYRDMHSYMVKFHQRNV 767

  Fly   546 MEFVGSVDEGIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSALHL----SEECFALFQ 606
            :|.:.|:..|..:         ||:...|.|.|:.         .|.....|    |.:.||...
Zfish   768 VEALESLKTGKLD---------AFIYDAAVLNYMA---------GRDEGCKLVTIGSGKVFASTG 814

  Fly   607 IGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVMQRSSSGRLLQASSSNSLREIIQEERQ 671
            .|....::|.:|.::|..||.....|.:.::  |..|          |.....:...|::..  |
Zfish   815 YGIAIQKDSGWKRQVDLAILQLFGDGEMEEL--EALW----------LTGICHHEKNEVMSS--Q 865

  Fly   672 LTTADTEGMFLLMALGYFLGATALVSEIVGGITNKCRQIIKRSRKSAASSWSSASSGSMLRTNAE 736
            |...:..|:|      |.|||...:|.    ||.....:.....:.......|...|.....:.|
Zfish   866 LDVDNMAGVF------YMLGAAMALSL----ITFIAEHVFYWHMRFCFMGVCSGKPGFTFTISRE 920

  Fly   737 QLS-------HDKRKANRREAAEVAQKMSFGMRELNLTRATLREIYGSYGAPETDHGQLDIVHTE 794
            ..|       .||..|....:|.:....|..:|.|. |...:..:.|..|:|   |..||.:..|
Zfish   921 IYSCIHGVEIEDKSSALNSPSATMNNTHSNILRLLR-TAKNMASLSGVNGSP---HSALDFIRRE 981

  Fly   795  794
            Zfish   982  981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 HisJ 287..>392 CDD:440596 19/107 (18%)
Lig_chan 405..662 CDD:459656 54/283 (19%)
grin2baNP_001429729.1 None

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