DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir21a and grid2

DIOPT Version :9

Sequence 1:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster
Sequence 2:XP_031759030.1 Gene:grid2 / 100487676 XenbaseID:XB-GENE-955038 Length:1007 Species:Xenopus tropicalis


Alignment Length:638 Identity:124/638 - (19%)
Similarity:223/638 - (34%) Gaps:183/638 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 LYADGLGSN---------------TPVVLTSWIKGALSRPHINLFPSKFQFGFAGHRFQISAANQ 289
            :|.:.||:|               .||   :.:.|:|:       ..|.:....|...:::...:
 Frog   396 IYFEILGTNYGEELGRGIRKLGFWNPV---TGLNGSLT-------DRKLENNMRGVVLRVATVLE 450

  Fly   290 PPFIFRIRTLDSSGMGQ-LRWDGVEFRLLTMISKRLNFSIDITETPTRSNTRGVVD-----TIQE 348
            .||:.    :..:.:|: .::.|....:|..:|..|.|..:|.............|     .|.|
 Frog   451 EPFVM----VSENVLGKPKKYQGFSIDVLDALSSYLGFKYEIYVASDHKYGSPQADGSWNGLIGE 511

  Fly   349 QIIERTVDIGMSGIYITQE---------RLMDSAMSVGHSPDCAAFITLASKALPKYRAIMGPFQ 404
            .:::| .|:|:|.:.||.:         |.||.::.|        .:..|.|.:..: |.:.||.
 Frog   512 LLLKR-ADMGISALTITPDRENVVDFTTRYMDYSVGV--------LLRKAEKTVDMF-ACLAPFD 566

  Fly   405 WPVW---------VALICVYLGGIFPIVFTDRLTLSHLMGNWGEVENMFWYVFGMFTNAFSFTGK 460
            ..:|         |.|:...|..:.|    .||.:..:...  .:.|..|:|:|.|...   .|:
 Frog   567 LSLWACIAGTVLLVGLLVYLLNWLNP----PRLQMGSMTST--TLYNSMWFVYGSFVQQ---GGE 622

  Fly   461 YSWSNTRKNSTRLLIGAYWLFTIIITSCYTGSIIAFVTLPAFPDTVDSVLDLLGLFFRVGTLNNG 525
            ..::..   :||:::||:|||.:|:.|.||.::.||:|:.....::.|:.||             
 Frog   623 VPYTTL---ATRMMMGAWWLFALIVISSYTANLAAFLTISRIESSIQSLQDL------------- 671

  Fly   526 GWETWFQNSTHIP-----TSRLYKKMEFVG-------------------------SVDEGIGNVT 560
                  ...|.||     .|.:|:.:...|                         :|.|.:..:.
 Frog   672 ------SRQTDIPYGTVFDSAVYEHVRVKGMNPFERDSMYSQMWRMINRSNGSENNVQESLEGIQ 730

  Fly   561 QSFFWNYAFLGSKAQLEYLVQSNFSDENISRRSALHLSEECFALFQIGFLFPRESVYKIKIDSMI 625
            :....||||:...|.|||:.   .:|::.|    .:......|....|......|.|:......|
 Frog   731 KVKHGNYAFVWDAAVLEYIA---INDQDCS----FYTVGNTIADRGYGIALQHGSPYRDIFSQRI 788

  Fly   626 LLAQQSGLIAKINNEVSWVMQRSSSGRLLQASSSNSLREIIQEERQLTTADTEGMFLLMALGYFL 690
            |..||:|.:..:.::  | ..|:....|      :|..:..|:...|......|:|.::|.|..|
 Frog   789 LELQQNGDMDILKHK--W-WPRNGQCEL------HSSMDTKQKGSSLDIKSFSGVFCILAAGIVL 844

  Fly   691 GATALVSEIVGGITNKCRQIIKRSRKSAASSWSSASSGSMLRTNAE----QLSHDKRKANRREAA 751
            .....:.|                      :|.:...||.:.:..:    .|.|..|:.|.....
 Frog   845 SCFIAMVE----------------------TWWNKKKGSRVPSKEDDKEIDLEHLHRRVNSLCTD 887

  Fly   752 EVAQKMSFGMRELNLT---------RATLREIYGSYGAPETDHGQLDIVHTEF 795
            :.:....|....::||         |.||.:|        :|.....|..|.|
 Frog   888 DESPHKQFSTSSIDLTPLDIDSLPNRQTLEQI--------SDFRNTHITTTTF 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 73/347 (21%)
Lig_chan 407..662 CDD:278489 60/293 (20%)
grid2XP_031759030.1 Periplasmic_Binding_Protein_type1 28..429 CDD:415822 7/35 (20%)
PBP2_iGluR_delta_2 440..806 CDD:270449 86/420 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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